Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4738 |
Symbol | |
ID | 8328936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5649849 |
End bp | 5651000 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644945181 |
Product | hypothetical protein |
Protein accession | YP_003102413 |
Protein GI | 256378753 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000391664 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGGTCT GGAGCGAGCT CAGGCGGTGG AGCCCGGACC GCGTCGGGCT GGTGGGCGAC CACCTGGCCG CGCGGAGCAG GCGGGTCGCC GGGTTGCAGG ACGAGTTGGA CGACGCCGGT CCCGCCGACT GGAGCGGTGC TGCGGCCGAC GCGGCGGCTG GCGACCTGCG GGCGCGGCGG CGCGAGTTGG AGGAGCTCGC CGCGCTGTTG TCCGCCGCCG TGCGGGCAGT GGACGACGCC GAGAACGCGG TGCGGGAACT GGTGCGCGGC GCCGAGTCGG TCGAGTTCTT CGCCTCCCGC AACGGGTTCC GGATCGCGGA CGACCGGGTG GTCCAGGTCG CCGCGCACGG CGGGGCGCAC CTCGGCGAGG TGCTGCACGC CGAGGTGCGG GCGATCCTGA CGACCGCCGC CGAGGTCGAC GGCGAGTTGG ACTCCGCGCT GCGGCGGGTG CTCGCGGACG GGACCGGTGC TGCCGGGACG ACGACCCCCG CTGCGGCCGA CCCCGTCGCG CGGCACCGCG AACTGCTCGT ACGGCACCAG GTCAAGCCGG ACGGCACGAC CACCTGGCCG AGCGGGCTGA CCGGGCTGAT CGCGGACGCC GCCGGGCGTG GTCGGACGAC CGTCACCCTG GCCGAGGCGG ACCTGCTCGA CGACCTCCAG CGGCGTCGGG GGTTGTTGGG GGTCAAGGAG TTCGCGGACG TCCAGGCCGA CGCGCTGGAG ACCGCGCACG AGCGGTTCGG GCCCGGTGGG CTGACCGACG GGCACGGGGA CGCGTTCCGG CACGCCTACT GGAACGCGCT GATGACCCGG AGGTACGGCG AGGAGTGGAC CCGCGACTTC GCCACCGCGC ACGAACGCGC CCCCACCGGG CACGAGGTCC CGGTCGCGAT GGACTTGCAC AACAACGAGG TCGGGCGCGA CATCGCCCGC GCCAACCCGG ACGCCGGACC CGGCGAGCTG GCGGAACTGG TCGAACGGGC GGTCAGGGAC GGCAGGACGC TCGTCGTCGA CCGGTCGGAC GTGCTGGTCC CCTCCAACGA GGTCGCGGTG GGGCAGACCC GCGCGAGCGA CGTGAAACCC TGGCCCGTCA ACGTGAATCG TGGGGACGAC CGCGATCCCG GCAAGCCCTC CGCCGTTCCG GACGGGTACT GA
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Protein sequence | MVVWSELRRW SPDRVGLVGD HLAARSRRVA GLQDELDDAG PADWSGAAAD AAAGDLRARR RELEELAALL SAAVRAVDDA ENAVRELVRG AESVEFFASR NGFRIADDRV VQVAAHGGAH LGEVLHAEVR AILTTAAEVD GELDSALRRV LADGTGAAGT TTPAAADPVA RHRELLVRHQ VKPDGTTTWP SGLTGLIADA AGRGRTTVTL AEADLLDDLQ RRRGLLGVKE FADVQADALE TAHERFGPGG LTDGHGDAFR HAYWNALMTR RYGEEWTRDF ATAHERAPTG HEVPVAMDLH NNEVGRDIAR ANPDAGPGEL AELVERAVRD GRTLVVDRSD VLVPSNEVAV GQTRASDVKP WPVNVNRGDD RDPGKPSAVP DGY
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