| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4654 |
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| Symbol | |
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| ID | 8328852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5541120 |
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| End bp | 5542514 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 644945100 |
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| Product | 3-carboxy-cis,cis-muconate cycloisomerase |
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| Protein accession | YP_003102332 |
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| Protein GI | 256378672 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0015] Adenylosuccinate lyase |
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| TIGRFAM ID | [TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0817649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTCGCTG ACACCGGACT GCTCTCGCCG GGCTGGGCCC GCACCGGGGT GGACGGCCTG
CTCGACGACC GGGCCTGGCT GCGCGCCATG ATCACCACCG AGGTGGCGCT CGCGCGGGCG
CAGGCGCGGC TGGGCGTCGT GCCGGAGGCC GCCGCCGAGA CCATCGCGGC GGCGGCCGAC
CCCGACGCGT TCGACTGGCC CGGCCTCGTG GAGGGCGTGC ACGCCACCGG GAACCCGGTG
GTCGCGTTCG TCTCCCAGCT CACCGCGATC GTCCGCGCGG CCGACACCGC CGCGCCCGCG
ACCGGCCCGT CCGCCGCCGA CCACGTCCAC CGGGGCAGCA CCAGCCAGGA CGTCCTGGAC
ACCGCCACGA TGCTGCTGTG CCGGGACGCG CTGCGCAGGC TCCGCACCGA CCTGCTCGCC
ACCGCCGCCG CGCTCGCCGC GCTGGCCGGG CGGCACCGCG ACACCCCCAT GGCGGGCCGC
ACCCTCACCC AGCACGCCGT CCCGATCACC TTCGGCCTCA AGGCCGCCGG GTGGCTGGCC
CAGGTGCTCG ACGCCGTCGA GCGGGTCGAG GCGGTGCTGG ACGGCGGGCT GCCGGTCTCC
CTCGGCGGCG CGGCGGGCAC CCTGGCGGCC TACGGCGAGT TCGCCGACGG CGACCCGCTC
GACCTCGTCG AACCGTTCGC CGCCGAGCTG GGCCTCGCCC CGCAGGCCCT GCCCTGGCAC
TCCGCCCGGA CCCCGATCGC CGACGTGGCC TCGGTGCTGG CGTTCGCCTC CGGGGCGCTG
GGCAGGCTCG CGGCCGACGT GGCGGTGCTC TCCCGCACCG AGATCGGCGA GGTCGCCGAA
CCGGCGGAAC CGGGGAGGGG CGCGTCCTCG GCCATGCCGC AGAAGCGCAA CCCGGTGCAC
GCCACCGCGA TCCTCACCGC CGCCAGGCAG GTCCCGGCGC TCGTCTCGGT GCTGCACCAG
TGCCTGGTGG TCGAGGACGA GCGGTCGGCG GGCGGCTGGC ACGCCGAGTG GCAACCGCTG
CGGGAGGCGC TGCGGCTGGT GCTGGGCGCG GCCCGCAACG CCGCCGCGCT CACGGCGGGC
CTGCGCGCGT TCCCGGACCG GATGCGGGAG AACCTCGCGC TCACCGGCGG CGCGGTCGTG
TCCGAGCGGC TCGGCGCCCG GCTCACCCCG GTGCTGGGCA AGGTGGAGAC CAAGCGGCTG
CTCACCGAGG CCACCGCCGC CACCTCGGGC CGCCCGGACG AGCTGCCGGA CTGGTTGCAC
ACCAGGCTGG CGGGCGCGGG ACCCGACCTG GAGGCGCTGC GCGCGCTGTG CGACCCGCGT
GGCTACACCG GCGCGTCCGG CGCGCTGGTC GACCGCGCGG TCGAGCGCTG GCGCGCGGTC
GGGGAGCGCG GGTGA
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| Protein sequence | MFADTGLLSP GWARTGVDGL LDDRAWLRAM ITTEVALARA QARLGVVPEA AAETIAAAAD
PDAFDWPGLV EGVHATGNPV VAFVSQLTAI VRAADTAAPA TGPSAADHVH RGSTSQDVLD
TATMLLCRDA LRRLRTDLLA TAAALAALAG RHRDTPMAGR TLTQHAVPIT FGLKAAGWLA
QVLDAVERVE AVLDGGLPVS LGGAAGTLAA YGEFADGDPL DLVEPFAAEL GLAPQALPWH
SARTPIADVA SVLAFASGAL GRLAADVAVL SRTEIGEVAE PAEPGRGASS AMPQKRNPVH
ATAILTAARQ VPALVSVLHQ CLVVEDERSA GGWHAEWQPL REALRLVLGA ARNAAALTAG
LRAFPDRMRE NLALTGGAVV SERLGARLTP VLGKVETKRL LTEATAATSG RPDELPDWLH
TRLAGAGPDL EALRALCDPR GYTGASGALV DRAVERWRAV GERG
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