| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4588 |
|---|
| Symbol | |
|---|
| ID | 8328786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 5436139 |
|---|
| End bp | 5441916 |
|---|
| Gene Length | 5778 bp |
|---|
| Protein Length | 1925 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644945035 |
|---|
| Product | amino acid adenylation domain protein |
|---|
| Protein accession | YP_003102267 |
|---|
| Protein GI | 256378607 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
|---|
| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCTTTC GAGTGCGCGA CCTGTTCGCC GACGACGCAG GCGAGGCCAC CGCTCAGCTG
GCCGCGTGGA ACGACACCGC CCGCGACTTC CCCACCGAGG TGGGCGTGCA CGAGCTCGTG
CGGCGGCAGG CCGCCGAGCA CGGCGCGCGC GGCGCGGTGA CCTTCGAGGG CGCGACCACG
ACCTACGCGG AGCTGGACGC CGCGGCGGCC GGGCTGGCGC GGCGGCTGGC GGGCGCGGGC
GTGCGGCCCG GTGACGTCGT GGCCATCGCG CTGCCCCCGT CGGAGCGGCG GATCGCCGCC
GTCCTCGGCG CGCTGCGCGC GGGCGCCGCG TACCTGCCGC TGGACCCCGA GCTGCCCGCG
CCGAGGCTGG AGTTCCTGCT CGCCGACGCC GGGGCCGCGG TGCTGATCAC CGACACGGCC
ACGCGGGAGG GCCCGGTCGC CGCCCACGAC GGGCCGACCG TGCTGTGCGA CCGGTTGTCC
CCGGACGGTG CTCCCACCGC CGAGCCCACC GCCGAGCCCG CGGAGTTCCC CGGCTCCGCG
CTGGCGGCCT ACGTCATCTA CACCTCGGGC TCCACCGGCC GCCCCAAGGG CGTCGCGGTC
GACCACCGCA GCCTGGTCAA CCGCCTGCTG TGGATGCGCG AGCGGTACGG GGTCGGGCAG
GGCGACGTGG TCCTGCACAA GACGTCCTTC GGCTTCGACG TCTCCGTGTG GGAGCAGCTG
CTGCCGCTGA TCAGCGGCGC CCGCCTGGTG ATCGCCCCGC AGGAGACCCG GCGAGACGCC
ACCGCGCTGG TCCGGCTCGT GCGCGCCGAG TCGGTGACGG TGCTGCACTT CGTGCCCTCG
CTGCTGCCCG CGTTCCTCGA CGTCGCGGAG GTCGAGCAGG CCCGCGCGCT GCGGGTGGCG
ATCTCCAGCG GCGAGGCGCT GCCCAAGCCG GTGGCCGTCG ACTTCGCCCG GCGCCTGCCG
CACTGCGCGC TGCACAACCT CTACGGGCCG ACCGAGGCCA CCATCGACGT CACGCACTGG
CCGGTCGACG GCGACGACGA GCGCCCCTTC GTGCCCATCG GCACCCCGAT CGACAACACC
AGCGTCTACG TGCTCGACGA CCACCTGGAA CCGCTGCCGG TCGGCGCGGA GGGCGAGCTG
TGCATCGGCG GGCAGGCGGT GGCGCTGGGC TACCTCGGGC GGCCCGCGCT CACCGCCGAG
AAGTTCGCGC CCGACCCGTT CGGCGCCCCC GGCGCGCGCA TGTACCGCAC CGGCGACCGG
GCCCGGTTCG GCCCCGACGG CGCGATCGAG TACCTGGGGC GGCGCGACGG GCAGGTCAAG
CTGCGCGGCT ACCGCGTCGA GCTGGGCGAG ACCGAGGCCG CGCTGCTGGA GTCCGACCTC
GTCCGGCAGG CGGCCGTGGT GGTGCGCGGC GAGGGCGGGG CCAAGCGGCT GGTGGGCTTC
GTCTCCGGCC GCCCGGAGGC CGCGGGCGGC GCCGAGGGCG CGGAGGCGCA CGTGCTGGCG
CGCCTGTCCG CGACCCTGCC CGCCTACCAG GTGCCGTCGC AGCTGGTGTG GCTCGACGCC
CTGCCGCTGA CCCCCTCCGG CAAGGTGGAC CGCGCGGCGC TGCCCGAGAC CGCGGCGGCC
CACCGGTCGT CCGCCGCGCC CGAGACCCCC ACCGAGCGGG CGATCGCGGC GCTGTGGGCG
GAGCTGCTGG ACGGCCCCGA ACCGGGCCTG GACGACGACT TCTTCCGCAC CGGCGGCGAC
TCGGTGTCCA GCATGAGGCT GGCCGCGCGG GCCCAGCGCC AAGGCGTCCG GCTCGACGTG
CAGCACATCT TCACCCACCG CACGGTCCGG GGCATGGCCG CCGCCGCCGA CGAGGCGTCC
ACCCGCCCGG TCGTGGCCGA GCCGCGCGGC GACGACGAGG AGGCGCTGCT GGCGGGTGTC
GACCCCGAGC ACCTGGCGCA GGTGCGCGCG CGCCCCGGCG TCGTGGACGT CTACCCCCTC
GCCCCGATGC AGGAGGGGAT GCTCTTCCGC GGCCTGTTCT GGCCCGACTC GGACGCCTAC
TTCAACCAGA ACGTGCTGGA GCTGGTCGGC GGGACCGACG AGGACGTGCT GCGCGAGGCG
TGGCGGCGGG TCGCCGACCG CTACGAGATC CTGCGCACCG GCTTCACCTG GCGCGACCGG
GCCGAGCCGC TCCAGTACGT GCGCGACGAC CTCGCGCCGC CGTGGGCGCT GCTCGACTGG
TCCGGCGAGG ACCCCGATCG CCGCGCGGAG CTGCTGGAGC GGCTGCTGGC CGACGACCGG
GCCGCCGGGC TCTCGCTGGC CGACTGCCCG CTGTACCGGC TGACCCTGGT GCGGCTCGGC
GGCGGACGGC ACTACCTGCT GTGGAGCCAC CACCACATCC TGCTCGACGG CTGGTGCCTG
TCCCTGATCT GGGGCGACGT GTTCCGGGTC TACGAGGAGC TGGCGCACGG CCGCGAGCCG
CGGCTGGAAC CGGTCCGCCC CTACCGGGAC TACGTGCGCT GGATCAGGGC CAGGGCCGCG
CGCAGCGAGG AGTCCGAGCG GTTCTGGCGC GAGTACCTGC GGGACCTGAC CCCCAGCCCG
TTCTCGACCG CCCCCGCCGA CCGGGAGGGC GAGTTCGACA CCGTCGTCCA CGAGTTCCCC
GAGCAGCTCA CGCGGCTGGT GAACGAGGCG GCGCGCGGGT ACGGCGTCAC CACCAACGCG
ATCAGCCAGG CGGCGTGGAG CATGCTGCTC GCGCTCCAGA CCGGCGCGCG CGACGTGGTG
CACGGCCTGA CCATCGCGGG CCGCCCGCCC GAGCTGGAGG GCTCGGAGCA CATGGTGGGC
ATCTTCATCA ACACCATCCC GCTGCGGATC AGGCTCGACC CCGACCAGAC GGTGACCGGG
CTGCTGGAGA CCATCCACCG CGACCTGGCC ACCACGGCGG CCCACGGCCA CGTCCCGCTG
GCCCAGATCA AGTCGTGGGC CTCCGGCGAG CGGCTGTCCG GCGGCCGGGT CTTCGACAAC
CTGGTGGCCT TCGAGAACTA CCCCGAGGAC AACCTGCCCG GCGACGACCT GAGCATCCAG
ATCATCGACC TGCACGCGCA GGAGAAGACC GAGTACCCGA TCGGTCTCAT CGTGCTGCCG
CTGCAGAAGC TCGCGTTCCA CTTCAACTAC GACACCACGC ACTTCACCCG CGCCCAGGTG
GACCGGTTCA TCGAGGTCTT CCGGCTGCTC ACCGAGCAGC TGTGCCGCCG CCCCTCGGCG
CGGCTGAGCG AGCTGGAGCT GCTGCCCGCC GCGGACCGCG AGCTGCTCGG GAGCTGGAAC
GGCGCGACCC GCGGCACGAC CGGCGACGGG CAGGAGCCGT CCCTGCTCGA CCTGTTCCTC
CGCCACCGGG CGGCCACGCC GGACGCGCCC GCCGTGGTGG AGAACGGGGT CGTGCTCGAC
TACGCCGGGC TTGACGAGCG CGCGATCGCG CTGGCGGGCC GGCTGGCCGA GGCGGGCGTG
CGCGCCGGGC ACCTGGTGGG CGTCTGCCTG CGGCGCTCCG CGGCCCACCC GATCGCGCTG
CTGGCCGTTT ACCGCAGCGG CGCGGTGCCG GTGCTGCTCG ACCCCGAGCA CCCGGTGGCG
CGGCTGCGGG AGGCGGCGGC GGACGCGGGC GTGGCCGCCG TGGTGACGAC GGCGGACCAG
GCCGGGTTCG AGGCGTGGCC GGTCGTCCAC CCCGACGGGG GGATCGTCGC GCCGACGGAG
CCCGCCGCCT GCCGACCCGG CTCGGCCGAC CCGGCCCGCG ACGCCTGCGT CGTCTACACC
TCGGGCTCGA CCGGCGGGCC CAAGGGCGTG CTCGCGCCCC AGGCGGGGCT GGTGAACCGG
GTGCTGTGGT CGGGTCGCGC GTTCCCCACC CCGGAACCGC CGCGCGTGCT GGCCACCGCG
GGCACCGCGT TCGACATCGC GCTGTGGGAG CTGTTCTTCC CGCTGGCGCA CGGGGGAGCG
GTGGTGACCG CGCCCCAGGA CGCCGTGCTC GACCCGGACG CGCTGGCCGA GCTGATCGTC
GCGGAGCGGG TGACCGTGGC GCACTTCCTG CCCAGCCTGC TCGCCGCGTT CCTGGACAGC
CCCAAGGCCG CCGGCTGCAC CGGGCTGGCG CACGTCCTGT CCGGCGGCGA GGCCGTCACC
CCCGCGATCG TCCGCGCCTT CACCGGCTCC GGCCTGCCCG CCCGGCTGCA CCAGGCGTAC
GGCCCGGCCG AGGCCTCGAT CAGCGTCACC CACCACACCT GCGCCCCGGA GGACGGCCTG
CGCGAGCGCG TGCCGATCGG CAGGCCCATC GACGGCGCCG GGGCGCACGT CGTGGACGAG
CACCTGCGCG AGCTGCCCGT CGGTTGCGTC GGCGAGCTGG CCGTCACCGG CGTCGCGGTC
GGGGCGGGCT ACCCGAACGA CCCGGAGCTG ACCGCGCGGC GGTTCCCTGC CAACCCCTTC
GGCGCGCAGC CGCTCTACCT CACCGGCGAC CTGGCCCGCT GGGGCGCCGA CGGCGAGCTG
GAGTTCCTCG GCAGGCGCGA CCGGCAGGTG AAGGTGCGCG GGCACCGGGT CGAGCCCGCC
GAGGTGGACC GCACCGCCGA GCTGCACCCC GGGGTGCGCC AGGCGGTCAC CGTCTTCCGC
GACGGCGCGC TGACCACGTT CGCGGCGCCG CGCGCGGGCG CCCTGCTCGA CGTGGCCGAC
CTGCGCCGCC TGCTGCGCGA GCGGCTGCCG GACTGGATGG TCGGCGAGCT GGTGGTGCTC
GACGCGCTGC CGGTGACCGG CAACGGCAAG GTGGACCAGC GCGCGCTGCT CGACCTGGCG
GGCGCCGGGA CCCGGTCGGC GGTCGTGGGC TCGCGCCCGC CCGCCACCGA GCTGGAGAAG
CTCGTCGCGC GCTGCTGGGA GGAGGTGCTG GGCGTCACGG GCATCGGCGC GCACGACGAC
TTCTTCGAGA TCGGCGGCCA CTCCCTGCTG GTGGTGCGGC TGCTCCGGGT CCTGCGGGAC
AACCTGCCGG AAGGGGTGCA CTGCGACGTG CCGCACATCC TCAAGGCGCC CACCGTCGCC
GGGCTCGCCG AGCAGCTGCT CGCCCCCGTC GAGGGCTCCG GGTCGGCCTA CGTGCACACC
CTCAACCCGG AGGCGACCGG CGGCGCGCTG GTCCTCGTGC ACCCCGGCGA GGGGCTGGCG
CTGCCCTACC ACGGGCTGGC GCCGCTGCTG CCCGACGTGC GCCTGCACGT CCTCTCCGAC
CCGCGCTTCG GGCAGTCGGA CAACCGGTTC GCCACCCTGG CCGAGATGGC CACCCGCTAC
GTCGAGTGGG TGCGCACCAC CGAGCCCGAG GGGCCGTACC GCCTCGGCGG CTGGTCCTTC
GGCGGCGTGG TGGCGCTGGA GATGGCCAGT CAGATGACCG CGCACGGCGA CGAGGTGTCG
GACCTGCTGC TCGTCGACAG CCACAACCTC AACGCCGCGC CCCGCACCGG GGACCCCCGC
GAGGGCGTGC GGCAGCGGCT GGTCGAGCTG GGCGTCGACC CGGACTCCCC GGAGGGCGTG
GACGTCGTGG AGGAGCTGCT GCACAACGGC GCCCTCGCCG CGCAGTACGC GCCCCCGGCC
TACCGGGGCC GGGTGAGCCT GCTGGTGACC CCCACCGACG GCGACCGCGA CGCCGTGCGC
GCGCGGGGCT GGGACCGGGC GCTGCTGCCG GACCTGGTCG TCGAACCCGT GCCGGGCGCG
CACGAGCGGT TGTTCGACGA GGAGCACCTG TCCGACACGG CGGACGCGAT CCGCCGCGCG
CTGGGAGGAG AGCGGTGA
|
|---|
| Protein sequence | MTFRVRDLFA DDAGEATAQL AAWNDTARDF PTEVGVHELV RRQAAEHGAR GAVTFEGATT
TYAELDAAAA GLARRLAGAG VRPGDVVAIA LPPSERRIAA VLGALRAGAA YLPLDPELPA
PRLEFLLADA GAAVLITDTA TREGPVAAHD GPTVLCDRLS PDGAPTAEPT AEPAEFPGSA
LAAYVIYTSG STGRPKGVAV DHRSLVNRLL WMRERYGVGQ GDVVLHKTSF GFDVSVWEQL
LPLISGARLV IAPQETRRDA TALVRLVRAE SVTVLHFVPS LLPAFLDVAE VEQARALRVA
ISSGEALPKP VAVDFARRLP HCALHNLYGP TEATIDVTHW PVDGDDERPF VPIGTPIDNT
SVYVLDDHLE PLPVGAEGEL CIGGQAVALG YLGRPALTAE KFAPDPFGAP GARMYRTGDR
ARFGPDGAIE YLGRRDGQVK LRGYRVELGE TEAALLESDL VRQAAVVVRG EGGAKRLVGF
VSGRPEAAGG AEGAEAHVLA RLSATLPAYQ VPSQLVWLDA LPLTPSGKVD RAALPETAAA
HRSSAAPETP TERAIAALWA ELLDGPEPGL DDDFFRTGGD SVSSMRLAAR AQRQGVRLDV
QHIFTHRTVR GMAAAADEAS TRPVVAEPRG DDEEALLAGV DPEHLAQVRA RPGVVDVYPL
APMQEGMLFR GLFWPDSDAY FNQNVLELVG GTDEDVLREA WRRVADRYEI LRTGFTWRDR
AEPLQYVRDD LAPPWALLDW SGEDPDRRAE LLERLLADDR AAGLSLADCP LYRLTLVRLG
GGRHYLLWSH HHILLDGWCL SLIWGDVFRV YEELAHGREP RLEPVRPYRD YVRWIRARAA
RSEESERFWR EYLRDLTPSP FSTAPADREG EFDTVVHEFP EQLTRLVNEA ARGYGVTTNA
ISQAAWSMLL ALQTGARDVV HGLTIAGRPP ELEGSEHMVG IFINTIPLRI RLDPDQTVTG
LLETIHRDLA TTAAHGHVPL AQIKSWASGE RLSGGRVFDN LVAFENYPED NLPGDDLSIQ
IIDLHAQEKT EYPIGLIVLP LQKLAFHFNY DTTHFTRAQV DRFIEVFRLL TEQLCRRPSA
RLSELELLPA ADRELLGSWN GATRGTTGDG QEPSLLDLFL RHRAATPDAP AVVENGVVLD
YAGLDERAIA LAGRLAEAGV RAGHLVGVCL RRSAAHPIAL LAVYRSGAVP VLLDPEHPVA
RLREAAADAG VAAVVTTADQ AGFEAWPVVH PDGGIVAPTE PAACRPGSAD PARDACVVYT
SGSTGGPKGV LAPQAGLVNR VLWSGRAFPT PEPPRVLATA GTAFDIALWE LFFPLAHGGA
VVTAPQDAVL DPDALAELIV AERVTVAHFL PSLLAAFLDS PKAAGCTGLA HVLSGGEAVT
PAIVRAFTGS GLPARLHQAY GPAEASISVT HHTCAPEDGL RERVPIGRPI DGAGAHVVDE
HLRELPVGCV GELAVTGVAV GAGYPNDPEL TARRFPANPF GAQPLYLTGD LARWGADGEL
EFLGRRDRQV KVRGHRVEPA EVDRTAELHP GVRQAVTVFR DGALTTFAAP RAGALLDVAD
LRRLLRERLP DWMVGELVVL DALPVTGNGK VDQRALLDLA GAGTRSAVVG SRPPATELEK
LVARCWEEVL GVTGIGAHDD FFEIGGHSLL VVRLLRVLRD NLPEGVHCDV PHILKAPTVA
GLAEQLLAPV EGSGSAYVHT LNPEATGGAL VLVHPGEGLA LPYHGLAPLL PDVRLHVLSD
PRFGQSDNRF ATLAEMATRY VEWVRTTEPE GPYRLGGWSF GGVVALEMAS QMTAHGDEVS
DLLLVDSHNL NAAPRTGDPR EGVRQRLVEL GVDPDSPEGV DVVEELLHNG ALAAQYAPPA
YRGRVSLLVT PTDGDRDAVR ARGWDRALLP DLVVEPVPGA HERLFDEEHL SDTADAIRRA
LGGER
|
|---|
| |