Gene Amir_4473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4473 
Symbol 
ID8328670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp5297612 
End bp5298289 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content76% 
IMG OID644944932 
Productnitroreductase 
Protein accessionYP_003102165 
Protein GI256378505 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCACCA CCCTCCCCGC CCTCGCCGAC CGCCTGATCC GGGGACGCCG CGCCACCAGG 
GCGTTCCTGC CCGACCCGCT GCCGAGGGAG ACCCTGGAGG CCGTGTTCAC CCTGGCGGGC 
GCCGCGCCGT CGAACTCCAA CGCGCAGCCG TGGCAGGTCG AGGTCGTCAG CGGCGCGGCC 
AAGGACCGGC TCGCCTCCGC GCTCGTCGCC GCGCACGCCG CCGGTCACCG CAGCGTCGAC 
TTCCCCTACA GCCACGACGT CTACTCCCCC ACCCACCTGC GCAGGCGCGC GGAGGCGGGC 
GCGGCGCTGT ACGGGGCGCT CGGCATCGGC CGGGAGGCGG AGGCGCGGCG GGCCGAGTAC 
GACGAGCGCA GCCTGCGGTT CTACGAGGCC CCGCACGTGG CGCTGCTGTT CGCCCCCGAC 
TCCGGCGACC CCAGGCTCAC CGCCGACGTC GGCATGTACG CCCAGACCCT GCTGCTGGCC 
ATGGAGGCGC ACGGCGTGGC GAGCTGCCCG CAGGCGCTGC TGAGCTTCTA CGCCGACGTG 
GTGCGCGAGA CCCTCGGCGT CACCGGGGGG AAGCTGCTGT TCGGCGTCGC GTTCGGGCAC 
GCCGACCCGA CGGCGCCGGT GAACGCGATC ACCGTGGGCC GCGCGCCGCT GGACGAGACC 
ACCCGGTTCC ACCGCTGA
 
Protein sequence
MPTTLPALAD RLIRGRRATR AFLPDPLPRE TLEAVFTLAG AAPSNSNAQP WQVEVVSGAA 
KDRLASALVA AHAAGHRSVD FPYSHDVYSP THLRRRAEAG AALYGALGIG REAEARRAEY 
DERSLRFYEA PHVALLFAPD SGDPRLTADV GMYAQTLLLA MEAHGVASCP QALLSFYADV 
VRETLGVTGG KLLFGVAFGH ADPTAPVNAI TVGRAPLDET TRFHR