| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4440 |
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| Symbol | |
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| ID | 8328637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5234581 |
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| End bp | 5240904 |
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| Gene Length | 6324 bp |
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| Protein Length | 2107 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 644944899 |
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| Product | thioester reductase domain protein |
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| Protein accession | YP_003102132 |
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| Protein GI | 256378472 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | [TIGR01746] thioester reductase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGATG ACCAGAAGGC CGTCGAGTAC CTGAAGTGGG TCACCGCCGA CCTGCGGCGC
ACCCGCGACC GCCTGTCCGA GCTGGAGGCC GCGGCGGACG AGCCGATCGC GATCATCGGC
ATGGGCTGCC GCTTCCCCGG AGGGGCGCAC GGCCCCGACG GGCTGTGGCG GCTGGTGGCC
GAGGAGCGGG ACGCCATCAC CGAGTTCCCC GCCGACCGGG GCTGGGACGT GGCGGCCCGC
TACGACCCGA GGCCGGGCAG GCCGGGCAAG ACCTACACCC GGCACGGCGG GTTCCTGCAC
GACGCCGCCG AGTTCGACGC GGAGTTCTTC CGCATCTCGC CCCGCGAGGC CACCGCCATG
GACCCGCAGC AGCGGCTGCT GCTGGAGGTC GCCTGGGAGG CGGTGGAGCA CGCGGGCATC
GACCCGAGGT CGCTGGCGGG CAGCCGGACC GGCGTGTTCG CGGGCATCGC CGCCCAGACC
TACAACCAGT CGCTGGACCA GCGCGAGTAC GCCGGATACC TGGCCACCGG CGTGGTCGGC
AGCGTCGCCT CCGGCCGCGT CGCCTACGCG CTCGGCCTGG AGGGCCCCGC CATCACCCTG
GACACCGCCT GCTCCTCGTC GCTGGTGGCC GCGCACCTGG CCGTGCGGTC GCTGCGCGCG
GGCGACTGCG ACCTCGCGCT CGCGGGCGGG GCCTCGGTCA CCGGGAGCCT GGACGGCTGG
CTGGAGTTCA GCGCCCAGGG CAACCTGGCC CCGGACGGCC GGTGCAAGTC GTTCGCCGCC
TCCGCCGACG GCACCGGCTG GTCCGAGGGC GTCGGCCTGC TCCTGCTGAC CAGGCTCTCG
CGGGCCAGGG AGCTGGGCCA CCCGGTGCTG GCCCTGATCC GGGGCAGCGC GGTCAACCAG
GACGGCGCCA GCAACGGGCT GGCCGCCCCC AACGGCCCCG CGCAGGAGCG GGTGATCCGG
GCGGCCGTCG CCGACGCCGG GATCACCCCG GCCGACGTGG ACGCCGTCGA GGCGCACGGC
ACCGGCACCA CCCTGGGCGA CCCCATCGAG GCCCAGGCGC TGCTCGCCGC CTACGGCAGG
GGAAGACCGG GCGACCGGCC GCTGTGGCTC GGCTCGCTCA AGTCCAACCT CGGGCACGCC
CAGGCCGCGG CGGGCGTGGG CGGCGTGATC AAGATGGTGC AGGCGATCCG GCACGGCCTC
CTGCCCAGGA CCCTGCACGT GGACGAGCCG ACGCCCGAGG TCGACTGGAG CCGGGGCGCG
GTGGAGCTGC TGCGCGAGTC CCGGCCGTGG CCGGAGGTGG ACCGGCCGCG CCGCGCGGGC
GTGTCCTCGT TCGGCATCAG CGGCACAAAC GCCCACCTCA TCCTCGAACA GGCCCCCGAA
CCCGAAGCCG CGCCTGCCGC CGAGCCCGCG CCCGCCGCGC CGCGCGACCT CGCCGGGGTC
GTGCCGCTGC TGCTGTCCGC GCCCACCGAC GCGGCCCTGC GCGCGCGGGC CGCCGACCTC
GCCGACCACC TCGACGCCCA CGACCACCAC CCCGCCGACG TCGCGCACGC GCTCGTCGCC
ACCCGCACCC GCTTCGACCG CAGGGCCGTC GTCGTCGGCG GCGACCGGGC CGAGCTGGCG
TCCGGGCTGC GCGCCCTCGC GGACGGCTCG CCGGACGCGC TCACCGGCTC GGGCCGCCCC
GGCGGGCTGG CCCTGCTGTT CGCCGGGCAG GGCGGGCAGC ACGCGGGCAT GGGCCAGGGC
CTGCGCGCCG CCCACCCGGT GTTCGCCCGC GCGCTCGACG AGGCGATCGA CGCCGTGGAC
GCCGAGCTCG ACGGGCACGC CGAGCACTCC GTGCGCGCCG CGCTCGAACG GCACGACGGG
CTGCACGACC GCATGGTCTA CGCCCAGACC GCCCTGTTCG CGCTGGAGAC CGCCCTGTTC
CGGCTGGTCG AGAGCTGGGG CCTGCGCCCG GACTGGGTGG CGGGCCACTC GGTCGGCGAG
GTCGCCGCCG CCCACGCGGC GGGCGCCCTG TCCCTGGGCG GGGCGGCGCG ACTGGTCGCC
GCCAGGGGCA GGCTCATGGA CGGCCTCGCC CCCGGCGGGG CCATGATCGC CCTGGAGGCC
ACCGAGGCCG AGGCCGAGCG GGAGCTGGCC GGGGAGCCCC TGGTCGGCGT CGCCGCGATC
AACGGCCCGC GCTCGGTCGT GATCTCCGGG GCCCACCGGC CCGCCGAGGC CGTCGCCGCC
CGCTTCGCCG CCAGGGGCCG CCGCGTCAAG CGGCTGCGCG TCAGCTGCGC CTCGCACTCG
CCGCTGATGG AGCCGATGCT CGCCGAGTTC CACCGGATCG CCTCCACCGT CGAGCACGCC
CCGCCCCGCG TTCCCCTGCT GTCCACGGTC ACCGGGCGCC CCGTCGAGGA CGGCGAGCTC
GGCCCCGACC ACTGGACCCG GCACGCCCGC CGCTCCGTCC GCTTCCTGGA CGCGGTGACC
CGGCTGGACG AGCTCGGGGT GACCGCGCTG CTCGAGGTCG GCCCGGACGG GGCGCTCACC
GCGCAGGCGC AGCGCGTCCT GGACGACTCG GAGCGGGACG GGCGCCTCGC GGTCCCCCTG
CTGCGGCCGG GCCACGACGA GCCGCGCACC GCCGCGACCG CCCTCGGCGC GCTGTGCGCG
GCGGGCCTCA CCCCCGACTG GGCCGCCGTG CACGGCCGCG ACGCCCGCCC GGTCGAGCTG
CCCACCTACC CGTTCCAGCG CCGCCGCTAC TGGCTGCGCG CCACCGGGTC CACCGAGGTC
GCCGACCTCG GCCTCGCCCC CGCCGACCAC CCGCTGCTCG GCTCGCTCGC CCAGCGCGCG
GACGCCGACA CCGCCCTGCT CGCCGGCAGG CTGTCCACCG CCGCGCACCC CTGGCTCGCC
GACCTGCCGG GCAGCGCCGA CGCGGCGCTG GTCGACCTGG CGCTGCGCGC GGCCGACCGC
ACCGACTGCG ACGTGGTGCG CGAGCTGTCC CTGCACGGCC CCGTCCGGCT CGCCGCCGGG
GACGCCACCA CCCTGCAGCT GGCCGTGGCC GCGCCGGACG ACGCGGGGGA GCGGGCGTTC
ACCGTCCACG CCCGCGCGGA CGCCGCCGAC GGCGCCTGGG AGCTGGTGGC GTCCGGGGCG
CTGGCCAGGC AGGTCGCGCT GCCCGCGCCG CCCGCCGAGG AGTGGCCGCC ACCGGGGGCC
CAGGCGGTGG AGGTCGACGC CGCGCTCGCC GGGCTGGGCG TCACCGCCGT GCTGCGCCGG
GGCGACGAGC TGTTCGCCGA CCTGGCCCCG CCCGCCGACC GGCTCGCCGC CGGGTTCGGC
CTGCACCCGC TGCTCCTGCA CGCCGCCACC GCCCCGCGCC CCGGCGGCGA CGCCACCCGC
CCGCGCCGCT GGCGCGACGT CCGCCTGCAC GCCACCGGCG CGGGCGCGCT GCGCGTGCGC
CTCACCCCCG GCGACGGGCG GTCGTTCGCG CTCACCGCCC ACGACCGCTC CGGCCTCCCT
GTGCTCACGG TGGGCGAGGT CGCCACCGCG CCCGCCGACC GGGGCCGGGG CGCCGAGCAC
GACGCCCTGT TCCGCGTCAC CTGGGAACCC ACCCGGCTGC CCGCCGCCGA CCGCGCCCCC
GAGTGGGCCT GGGACAGCGA CCACCGGCCG GGCGGGCGGG CCCCGGAGGT GCTGCTGCTG
CGCCCGAGCC CGGCCCGCCC GCACGACCCG GTCCCGGCCG CGCACGACCT GCTCCGGCAC
GCCATGGCCC GGCTGCGGGA CCTGCTCGCC GATCCCGCAC TCGCCGCGAC CAGGCTGGTC
GTGCTCACCG AGGGCGCGGT CGCCACCGAC GCGGCCGAGG AGGCGGACCT GGCGGGCGCG
GCCCTGTGCG GCCTGGTCCG CTCGGTCCAG TCCGAGCACC CCGACCGGGT CGTGCTCGTC
GACACCGCCA CGGGGGGCGA CCCGGACCCG GCCCCGGTGC TGGCCGCCGC GCTGGCCGTG
GGCGAGCCCC AGTTCGCCCT GCGCGGCGAC CGGGTCCTGG TGCCCCGCAT GTCCAGGCTG
CCGCTGCCGT GGCCGCCCGC CACCCCGTGG CGCGCCGACG GGACCGTGCT GATCACCGGC
GGCACCGGCG CCCTCGGCGC GACGGTGGCC CGGCACCTGG TGCGCGGGCA CGGCGTCCGC
CGCCTGCTGC TGACCAGCCG CCGGGGACCC GAGGCGGCGG GCGCCGCCGA CCTGGTGGCC
GAGCTGACCG CCCTGGGCGC CGACGTCACC GTCGCCGCCT GCGACGTCAC CCGCCGGGAG
GCCGTGCGCG ACCTGCTCGC CTGCGTCCCC GACGCGCACC CGCTGTCCGC CGTCGTGCAC
ACCGCGGGCG TGCTGGCCGA CGGGATGCTC GCCTCGCTCA CCGAGGACGA CCTCACCTCG
GTGCTGCGCC CCAAGGTCGA CGCGGCCTGG CACCTGCACG AGCTGACCCG CGACGCCGAC
CTGTCCGCGT TCGTCCTGTT CTCCTCGGTG ACCGGCGTGA TGGGCACCCC CGGCCAGGCC
AACTACGCCG CCGCCAACAG CTTCCTGGAC GCGCTGGCCG CCCACCGCGC CCGCCGCGGC
CTGCCCGCGG TGTCCGTGGC CTGGGGGCTG TGGGAGGGGG CCAGCACCAT GACCGAGCAC
CTCACCGAGG TGCACCTGAC CCGCATGGCC AAGGAGGGCC TGCTGCTCCT TCCCGTCGAC
CTCGGCATGG CCGTCCTGGA CGCCGCCGCG GGCCAGCCGG AGCCCGCCGT GGTCGGGATG
CCGGTCGACC TCGCCGCCAC CCGCGCCCAC CACGCGCAGC CCGTGCTGAT GCGCGGCCTC
ACCAGGACCA GGCTCCGCCC CGAGTCCGCC GAGGCGGGCG CGGCCGGTGG CGGCGCGCTG
CTGGAGCGGC TGGCCGCGCT GGACGCCCCG GCCCGCCGGT CGCTGCTGCT CGGGATCGTC
GCCGAGCACG CCGCCGCCGT CCTCGGCCGG GACGAGCCGC TGGCCGCCGA CCAGGTGTTC
CAGGACGCGG GCTTCGACTC GCTCACCGCC GTCGACCTGC GCAACCGCCT GGCCAAGGTG
GTGCCCGCGC CCCTGCCCGC CACCGCCGTG TTCGACCACC GCACCCCGGA GGCGCTGGCC
GGGCGCCTGC TCGCCGACCT GCTCGGCGAG CGGGTGGCCG AGACCGGGGT CGACCTGGCG
GCCGAGATCG CCCTGGCCCC CGACGTCGTC GCGGACACCG CCCCGCACCT GACCACCGAC
CCCGCCGACG TCCTGCTCAC CGGGGCCACC GGCTTCCTCG GGGCGTTCCT GCTGCGCGAC
CTGCTGCGGC ACACCCGCGC CAGGGTGCAC TGCCTGGTGC GCGGCGCCGA CGAGCCGGAC
GCCCGGCGGC GCCTGCTGCG CACGGCCGAG CGCTACGGCA CCGGGATCGA CCTGGACCGC
GTCGAGGTCG TCGTCGGCGA CCTCGCGCAG CCGGGCCTCG GCCTGGCCCC CGAGGTCTTC
GACCGGTTGG CCCGCACCGC CGAGGTGGTG TTCCACGCGG GCGCGGGCGT CAACTGGATC
TACCCGTACC CGGAGCTGAA GGCGGCCAAC GTCGGCGGCA CCGAGGAGGT CCTGCGGCTG
GCCGCCCGGC ACCGCACCGT GCCGGTGCAC CACGTGTCCT CCACCGGCGT CTACGACCAG
CGGCCCGGCA CGCGCCTGAC CGAGCTGGAC CCCACCGGCC CACCCGAGGT CCTCGGCAAC
GGCTACCGGC GGTCCAAGTG GGTCGCGGAG GGCCTGGTCG AGCTGGCCAG GCGGCGCGGC
GTCCCGGTGT CGGTGTACCG GGTCGACTCG ATCTCCGGCG ACCAGGAGCG CGGCGCCTGC
CAGGACCAGG ACTTCGTGTG GCTGAGCGTG CGCGGCATCC TGGAGTCCGG GGCCGCGCCG
GAGGGGCTCG ACATCGCCTT CCACCCCACC CCGGTGGACT TCGTCAGCCG CGCCGTGGTC
GCGCTCGCGG GCAGACCCGC GAGCCTCGGC GAGACCGGCC TCGGCGAGAC CTACAACGTG
TCCAACGAGG ACTCGCTGAC CTTCACCGAG GTCGTGACCG CGCTGCGCGG GATGGGCTAC
GACCTCCCCG AGGTGCCCAG GGAGCGGTGG AGCGAGCTGG TCCGCCGCGA CCCGTCGAAC
GCGCTGACGC CGCTGCTCGA CGTGTTCGAG CTGGCGTTCA CCGGCGCGGG CGGCTACCCG
GACATCGCCA CCAAGAAGCT CGACGACGCG CTGACGGGCA CCCCGGTGAG CTGCCCGCCG
ATCACCGGGG AGCTGCTGGC GACCTACCTG GGGTTCTTCG TGCGCACCGG CTACTTCCCG
CCGCCGCCGG GTGGGACCCG CTGA
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| Protein sequence | MPDDQKAVEY LKWVTADLRR TRDRLSELEA AADEPIAIIG MGCRFPGGAH GPDGLWRLVA
EERDAITEFP ADRGWDVAAR YDPRPGRPGK TYTRHGGFLH DAAEFDAEFF RISPREATAM
DPQQRLLLEV AWEAVEHAGI DPRSLAGSRT GVFAGIAAQT YNQSLDQREY AGYLATGVVG
SVASGRVAYA LGLEGPAITL DTACSSSLVA AHLAVRSLRA GDCDLALAGG ASVTGSLDGW
LEFSAQGNLA PDGRCKSFAA SADGTGWSEG VGLLLLTRLS RARELGHPVL ALIRGSAVNQ
DGASNGLAAP NGPAQERVIR AAVADAGITP ADVDAVEAHG TGTTLGDPIE AQALLAAYGR
GRPGDRPLWL GSLKSNLGHA QAAAGVGGVI KMVQAIRHGL LPRTLHVDEP TPEVDWSRGA
VELLRESRPW PEVDRPRRAG VSSFGISGTN AHLILEQAPE PEAAPAAEPA PAAPRDLAGV
VPLLLSAPTD AALRARAADL ADHLDAHDHH PADVAHALVA TRTRFDRRAV VVGGDRAELA
SGLRALADGS PDALTGSGRP GGLALLFAGQ GGQHAGMGQG LRAAHPVFAR ALDEAIDAVD
AELDGHAEHS VRAALERHDG LHDRMVYAQT ALFALETALF RLVESWGLRP DWVAGHSVGE
VAAAHAAGAL SLGGAARLVA ARGRLMDGLA PGGAMIALEA TEAEAERELA GEPLVGVAAI
NGPRSVVISG AHRPAEAVAA RFAARGRRVK RLRVSCASHS PLMEPMLAEF HRIASTVEHA
PPRVPLLSTV TGRPVEDGEL GPDHWTRHAR RSVRFLDAVT RLDELGVTAL LEVGPDGALT
AQAQRVLDDS ERDGRLAVPL LRPGHDEPRT AATALGALCA AGLTPDWAAV HGRDARPVEL
PTYPFQRRRY WLRATGSTEV ADLGLAPADH PLLGSLAQRA DADTALLAGR LSTAAHPWLA
DLPGSADAAL VDLALRAADR TDCDVVRELS LHGPVRLAAG DATTLQLAVA APDDAGERAF
TVHARADAAD GAWELVASGA LARQVALPAP PAEEWPPPGA QAVEVDAALA GLGVTAVLRR
GDELFADLAP PADRLAAGFG LHPLLLHAAT APRPGGDATR PRRWRDVRLH ATGAGALRVR
LTPGDGRSFA LTAHDRSGLP VLTVGEVATA PADRGRGAEH DALFRVTWEP TRLPAADRAP
EWAWDSDHRP GGRAPEVLLL RPSPARPHDP VPAAHDLLRH AMARLRDLLA DPALAATRLV
VLTEGAVATD AAEEADLAGA ALCGLVRSVQ SEHPDRVVLV DTATGGDPDP APVLAAALAV
GEPQFALRGD RVLVPRMSRL PLPWPPATPW RADGTVLITG GTGALGATVA RHLVRGHGVR
RLLLTSRRGP EAAGAADLVA ELTALGADVT VAACDVTRRE AVRDLLACVP DAHPLSAVVH
TAGVLADGML ASLTEDDLTS VLRPKVDAAW HLHELTRDAD LSAFVLFSSV TGVMGTPGQA
NYAAANSFLD ALAAHRARRG LPAVSVAWGL WEGASTMTEH LTEVHLTRMA KEGLLLLPVD
LGMAVLDAAA GQPEPAVVGM PVDLAATRAH HAQPVLMRGL TRTRLRPESA EAGAAGGGAL
LERLAALDAP ARRSLLLGIV AEHAAAVLGR DEPLAADQVF QDAGFDSLTA VDLRNRLAKV
VPAPLPATAV FDHRTPEALA GRLLADLLGE RVAETGVDLA AEIALAPDVV ADTAPHLTTD
PADVLLTGAT GFLGAFLLRD LLRHTRARVH CLVRGADEPD ARRRLLRTAE RYGTGIDLDR
VEVVVGDLAQ PGLGLAPEVF DRLARTAEVV FHAGAGVNWI YPYPELKAAN VGGTEEVLRL
AARHRTVPVH HVSSTGVYDQ RPGTRLTELD PTGPPEVLGN GYRRSKWVAE GLVELARRRG
VPVSVYRVDS ISGDQERGAC QDQDFVWLSV RGILESGAAP EGLDIAFHPT PVDFVSRAVV
ALAGRPASLG ETGLGETYNV SNEDSLTFTE VVTALRGMGY DLPEVPRERW SELVRRDPSN
ALTPLLDVFE LAFTGAGGYP DIATKKLDDA LTGTPVSCPP ITGELLATYL GFFVRTGYFP
PPPGGTR
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