Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4396 |
Symbol | |
ID | 8328593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5194084 |
End bp | 5194773 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644944858 |
Product | ThiJ/PfpI domain protein |
Protein accession | YP_003102091 |
Protein GI | 256378431 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.817185 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACATCC TCATCGTGCT CACCTCCCAC GACCGGCTCG GCGACACCGG CAAGCCCACC GGCTTCTGGC TGGAGGAGCT CGCCGCGCCC TACTACCGGT TCAAGGACGC GGGCGCCCGG CTCACCCTCG CCTCGCCCAA GGGCGGTCAG CCGCCGCTCG ACCCCAAGAG CAACGAGCCC GACAGCCAGA CCGACGACAC CCGCCGGTTC GAGGCCGACG CCGAGGCCAC CGCCGCGCTC GCGAGCACCG TCGAGCTGGG CTCCGTCGAC CCCGCCGACT ACGACGCCGT CTTCTACCCC GGCGGCCACG GCCCCCTCTG GGACCTCGCC GAGGACGCCG ACTCGCTGCG CGTCATCCAG GAAACCCACC GCGCGGGCAA GCCCCTCGCG CTGGTCTGCC ACGCCCCCGG CGTCCTGCGC CACGCCGTCG ACGCCGACGG GCAGCCGCTG GTCAAGGGCA AGCGCGTCAC CGGGTTCACC AACACCGAGG AGGACGGCGT CGGCCTGACC GAGGTCGTGC CGTTCCTGGT CGAGGACGTG CTCAAGGCGG GCGGCGGCGA CTACTCCAAG GGCCCCGACT GGGCGCCCTA CGTCGTGCGC GAGGGCCTGC TGGTGACCGG CCAGAACCCG GCCTCCTCCG CGCCCGCCGC CGACGCCCTG CTCGACCTGC TGCCCGCGCG CAACGGGTGA
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Protein sequence | MNILIVLTSH DRLGDTGKPT GFWLEELAAP YYRFKDAGAR LTLASPKGGQ PPLDPKSNEP DSQTDDTRRF EADAEATAAL ASTVELGSVD PADYDAVFYP GGHGPLWDLA EDADSLRVIQ ETHRAGKPLA LVCHAPGVLR HAVDADGQPL VKGKRVTGFT NTEEDGVGLT EVVPFLVEDV LKAGGGDYSK GPDWAPYVVR EGLLVTGQNP ASSAPAADAL LDLLPARNG
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