Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4390 |
Symbol | |
ID | 8328587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5189293 |
End bp | 5190555 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644944852 |
Product | peptidase S26B, signal peptidase |
Protein accession | YP_003102085 |
Protein GI | 256378425 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0681] Signal peptidase I |
TIGRFAM ID | [TIGR02228] signal peptidase I, archaeal type |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGCCCT GGTGGCGCCT GGTGGCGCGG TGCGCCCTGG CGTTCACCGG CGCCGTCGCG CTCACCCTCG CGCTGTGCGC GTTCGCCCCG GTGCTGTGGG GCTGGCGGCC GGTGGTGGTC ACCTCCGGGT CGATGGAACC GCTCGTGCGG CCCGGCGACG TGGTGCTGCT CGACCCTACC CCCGACCGCG AACCGCTGGT CGGGGACGTC GTCGTCTACT CCCGGTCCGA CGCGCCGTCG GTGACGCACC GGGTCGTCGG CCGCGACGAC GACGGCCGCT ACCGCACCAG GGGCGACGCC AACCCCACCC CGGACGCGGC GTCCGTCGCG CCCGAGGACG TGCTGGGTCG GGTGCGCGGG CTGGTGCCGG GGCTCGGCGC GCCCGCGCTG TTCCTGCACC GGCACCCGTC CGCCGCCGTC CCGCTGGCCG TGCTCGGCGG CGCGGGGCTG CTCGTGCTGC TGCTCTCCCG CCGCCGACCG CGCGCCGCCG CTGCCGCCGT GCTGCTGGTC CCCGCGCTCG CGGTCACCAC CGGCGGGGTC GTGGGCCGCA CCGAGGCGGA GTTCTCCGCG ACCACCGCCG TGCCCGCGAC CGTCGAGACG GTCTCCCGCT TCTACCCGCA GAAGGTGCTC GCCGCGAACC CCGTCAGCTA CTGGCGGCTC GGCGAGAAAT CCGGGAACGC CCGCGCCGAC GAGCGCGGCG CGAACCCCCT GACCTGCGTC GGGGCCACCG GCGGCGCGCC GGGCGCGCGC CCGCCCGACT CGGACACCGC CACCACCCTG CCCACCGCGT CGGCCCACTG CGCGGCGGGC AGCGGCGCGG CGCTGAGCTT CACCGGGCCG TTCACGGTGA TCGTCTGGAC CCGCTCCACG GCGTTCCCCC CGACCCCGCA CGGCCGCCTC GTCGCCAAGT ACGGCGGCGG GACCGGGCAG ATCAACTACC TGCTGTCCTG GAACGACGCC ACGACGGCCA TGCGCGCGCT GCTGGACACC GGGAGCGGCC GGTACACCGT GGTCAAGCCG ATGCCGTCGG ACACCGCCTG GCACGAGGTG GCGATGACCT GGGACGGGGC CGGACTGCGG CTGTACCTGG ACGGGCAGCC CGCGGGCTCC ACCGCGACGG TGGGCACCCC GGTGACCACG CCGAAGCCGT TCACGCTCGG GTACACCGAC GCGGACTCCG TGGTGGGGGA CGTGGACGAG GTGTCGGTGT TCGCGCGGGC GCTGACCGAC GCGGAGATCG CCGACCTGCA CGCCGCGTCC TGA
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Protein sequence | MKPWWRLVAR CALAFTGAVA LTLALCAFAP VLWGWRPVVV TSGSMEPLVR PGDVVLLDPT PDREPLVGDV VVYSRSDAPS VTHRVVGRDD DGRYRTRGDA NPTPDAASVA PEDVLGRVRG LVPGLGAPAL FLHRHPSAAV PLAVLGGAGL LVLLLSRRRP RAAAAAVLLV PALAVTTGGV VGRTEAEFSA TTAVPATVET VSRFYPQKVL AANPVSYWRL GEKSGNARAD ERGANPLTCV GATGGAPGAR PPDSDTATTL PTASAHCAAG SGAALSFTGP FTVIVWTRST AFPPTPHGRL VAKYGGGTGQ INYLLSWNDA TTAMRALLDT GSGRYTVVKP MPSDTAWHEV AMTWDGAGLR LYLDGQPAGS TATVGTPVTT PKPFTLGYTD ADSVVGDVDE VSVFARALTD AEIADLHAAS
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