Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4368 |
Symbol | |
ID | 8328565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5159653 |
End bp | 5160795 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644944830 |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_003102063 |
Protein GI | 256378403 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCGAG CACTGACCGA CGAGCGCCGC GACCTGGTCG CCGCGGTCGC GGACTTCTGC CGCCGCGAGT GCGGGACCAA GGAGCAGCGG GACAAGCTGA CCGAGAACGG CAGGGAACCG CACAACCAGC GGCTGTACGA GAAGATGGCC GACCTCGGCT GGCTCGGCAT CGCCATCCCC GAGGAGCACG GCGGCGCCGG GCTCGGCATG GTGGACCTGT GCCTGTTCCT CGAGGAGAGC TCCTACGGGC TCGCCCCCAT CAGCGGCTTC GGCACCACCA TCATCACCGC CGCCGCGTAC GAGAAGTTCG GCACCGAGGA GCAGAAGCGC GCCGTCCTCG GCGGCGTGGT GCGCGGCCGG GTCGAGGCGG TGTCGATGTC CGAGCCGGGC GCCGGGTCCG ACGTCGGCGC GCTGACCTGC CGGGCGGACA AGGTCGACGG CGGGTACGTC ATCAACGGCC AGAAGACCTG GTGCTCCAAC GCCCACTTCG CCGACCACGT CCTGCTGATC GCCAGGACGT CCAGGGACGA GGGCAAGCAC GGCGGCCTGA CCCAGTTCAT GGTGCCCGCC GACGCCGAGG GCCTGCGGAT CAGCGGCATC GAGACCATGG GCGGGCGCGA GGTCAACGAC CTGTACTTCA CCGACTGCTT CCTGCCCGAC TCGGCCGTCG TCGGCGTGCC AGGCCAGGGC TGGGCGCAGC TGATGGCCGG GCTGAACCTG GAGCGGATGA TCCTGGCCGC CCTCATGCTC GGCGTGGCCC GGCGCGCCTT CGACGACACC CTCGCCTACG TGCGCCAGCG CGAGCAGTTC GGCAGGCCGA TCGGCTCGTT CCAGGCCCTC AAGCACCGCA TCGCCGACAT GGCCGTGGAG CTGGAGTGCG CCCGGCTGCT GCTCGACGAC GTCGCCGCGA CCATCGACGC CAACCCCGGC AAGGTGTTCG CGCGCGAGGC GTCCATGGCC AAGCTCAAGT GCACCGAGCT GGCCAAGCAC TTCGCGCTGG AGGGGATGCA GATGCTCGGC GGCTACGGCT ACGCCACCGA GTACGGCATG GAGTCGCTGC TGCGGTCCGC CGTCGTGTCC ACTGTGTACG GTGGGACGAG CGAGATCCAG CGCGACATCA TCGGCAAGAC CTACGGGCTG TAG
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Protein sequence | MPRALTDERR DLVAAVADFC RRECGTKEQR DKLTENGREP HNQRLYEKMA DLGWLGIAIP EEHGGAGLGM VDLCLFLEES SYGLAPISGF GTTIITAAAY EKFGTEEQKR AVLGGVVRGR VEAVSMSEPG AGSDVGALTC RADKVDGGYV INGQKTWCSN AHFADHVLLI ARTSRDEGKH GGLTQFMVPA DAEGLRISGI ETMGGREVND LYFTDCFLPD SAVVGVPGQG WAQLMAGLNL ERMILAALML GVARRAFDDT LAYVRQREQF GRPIGSFQAL KHRIADMAVE LECARLLLDD VAATIDANPG KVFAREASMA KLKCTELAKH FALEGMQMLG GYGYATEYGM ESLLRSAVVS TVYGGTSEIQ RDIIGKTYGL
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