Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4321 |
Symbol | |
ID | 8328518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 5087147 |
End bp | 5088118 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644944786 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003102019 |
Protein GI | 256378359 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGGCG GCTACGGCAG GTACGCGGCG GGGAGGGTCG CGCAGGCGGC CGTGGTGGTG CTGCTGGCCT ACGCGTTCAC GTTCGTCGTG ATCAGCGTGC TGCCCGGCGA CCCGGTGACC TCCACCCTGC GCGACCCGCA GAACGGGTTC ACCGAGGAGG AGATCGCCGC GATCGTCGCC TACTACGGGC TGGACCGGCC GGTGCACGAG CAGCTGTGGG AGTCGCTGAC CCGGTTCCTG GTCGGGGACT TCGGGGTCTC GCTGCGCTCG GGGCTGCCGG TGGCGGACCT GGTCGGCGAG GTGCTGTGGT CGACGGTCGT GCTGGCGCTG TCCGCGCTGG TGGTGGCGCT GGTGCTGGCG TTCGCGGTCG CGGCCGGTGT CCGGTGCCTG CCGCGGGGGC AGGGCGTGCT GCGGGCGTTC CCGTCGCTGT TCCTGTCGGT GCCCAACTTC GTGATCGGGC TGCTGCTGAT CAACGTCTTC GCGTTCCAGC TGGGCCTGTT CCGGGTGATC GACTCGGAGG GCCCGACGGC GACGCTGTTC GCCGCGATCG CGCTGGGCAT CCCGGTGTCG GCGCAGGTGG CTGAGGTGCT GATCGCGAAC CTGGACCACG AGTCGGACCA GGAGTACGCG GCGGTGGCCC GCTCGCGGGG CCTCGGGCGC ACGGCGCTGC TGCTGCGGCA CCTGCTCAAG CCCTCGTCGC TGCCGGTGGT GACGGTGGTC GCGCTGACCG TCGGGGAGCT GCTGGGCGGC GCGGTGATCA CGGAGAAGAT CTTCGGGCGT ACGGGGGTCG GGTCGCTGGT GGAGCGGTCG GTGACGACGC AGGACCTGCC GGTGCTGCAA GCGGTCGTGG CGCTGGCGGC GGTGGTGTTC GTGGTGGTGA ACCTGGTGGC CGACCTGGTG CACCCGCTGC TGGACCCGCG CGTGCGGGTC GGCGCGGCGG CGGCGCGCGA GCGGGCGGGG GTGGCGCGGT GA
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Protein sequence | MSGGYGRYAA GRVAQAAVVV LLAYAFTFVV ISVLPGDPVT STLRDPQNGF TEEEIAAIVA YYGLDRPVHE QLWESLTRFL VGDFGVSLRS GLPVADLVGE VLWSTVVLAL SALVVALVLA FAVAAGVRCL PRGQGVLRAF PSLFLSVPNF VIGLLLINVF AFQLGLFRVI DSEGPTATLF AAIALGIPVS AQVAEVLIAN LDHESDQEYA AVARSRGLGR TALLLRHLLK PSSLPVVTVV ALTVGELLGG AVITEKIFGR TGVGSLVERS VTTQDLPVLQ AVVALAAVVF VVVNLVADLV HPLLDPRVRV GAAAARERAG VAR
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