Gene Amir_4293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4293 
Symbol 
ID8328490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5055248 
End bp5056090 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content72% 
IMG OID644944760 
ProductABC transporter related 
Protein accessionYP_003101993 
Protein GI256378333 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCACCA CCCACACCCT CGCGGTCGAG GACCTGACCA TCGGCTACGG GGACCGGACG 
GTCATCAGCG GGCTCGACCT GGAGATCCCG CCCGGCAGGA TCACCGTGAT CGTCGGGGCC
AACGCGTGCG GCAAGTCCAC GCTCCTGCGC TCGATGTCCC GGCTGCTGGC CCCCAAGGGC
GGCCGGGTGC TGCTCGACGG CAAGCTCGTG CACAAGACCC CCGCGAAGGA GCTGGCGCGG
GTCATGGGCC TGCTGCCGCA GGCCCCGATC GCCCCCGAGG GCATCACCGT GACCGACCTG
GTCGGCCGGG GCAGGCACCC GCACCAGGGC ATCATGTCCC GCTGGAGCAA GGAGGACGAC
GTCGCGGTGG CCGCCGCCCT CGACGCCACC TCCACCGCCG ACCTGGCCGA GCGCTCGGTC
GACGAGCTGT CCGGCGGGCA GCGGCAGCGG GTGTGGATCG CGATGGTCCT GGCCCAGCAG
ACCGACCTGC TGCTGCTGGA CGAGCCGACG ACGTTCCTGG ACGTGAGCCA CCAGGTCGAG
GTCCTGGACC TGCTGACCGA CCTGAACCGC TCGCGCGGCA CGACGATCGT GATGGTCCTG
CACGACCTCA ACCTCGCGGC CCGCTACGCG GACCACCTGA TCGCCCTGGC GGACGGCGCG
CTGCACTCGG CCGGCCCGGC GGCGGAGGTG CTGACGGAGG AGGGCGTGCG CGCGACGTTC
GGCCTGGACT GCCGCGTGAT CACCGACCCG GTCTCCGGCA AGCCGCTCAT GCTGCCGATC
GGTCGGCACC ACTCGGTGGT GGGCGGTGCT GTGGCGGACG GTGCTGTGGT GGACGGCGAG
TAG
 
Protein sequence
MTTTHTLAVE DLTIGYGDRT VISGLDLEIP PGRITVIVGA NACGKSTLLR SMSRLLAPKG 
GRVLLDGKLV HKTPAKELAR VMGLLPQAPI APEGITVTDL VGRGRHPHQG IMSRWSKEDD
VAVAAALDAT STADLAERSV DELSGGQRQR VWIAMVLAQQ TDLLLLDEPT TFLDVSHQVE
VLDLLTDLNR SRGTTIVMVL HDLNLAARYA DHLIALADGA LHSAGPAAEV LTEEGVRATF
GLDCRVITDP VSGKPLMLPI GRHHSVVGGA VADGAVVDGE