Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4282 |
Symbol | |
ID | 8328479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 5044329 |
End bp | 5045093 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 644944749 |
Product | putative transcriptional regulator, PaaX family |
Protein accession | YP_003101982 |
Protein GI | 256378322 |
COG category | [K] Transcription |
COG ID | [COG3327] Phenylacetic acid-responsive transcriptional repressor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.399485 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACGAGC GGATCACCCC GAGGACGGTC GTCGAGGCGC TGCTGCCCGA CGAGGGCGCG GTCGACCTCG CGCTGGTGTA CGACACGGCG AACGCGGTCG GCGTGGCCGA CCAGCCGCTG CGGCTGACGC TGCGGCGGAT GGCGTCGGCG GGCGAGCTGG AGCAGTCCGG GCGCGGGCGG GCGGGCCGCG TCCGGCTCAC CGACCAGGGC CGGGAGCGGC TGCGGCGGGA CCGGGTCGGG CTCGCGCTGG CGTTCGCGCA GGACGCCGGG GAGGCGCCGT GGGACGGGCG GTGGTGGCTC GCGGCGATCA GCACGCCCGA GCGGGAGCGG GCGGTGCGGG ACGCGCTGCG CCGCGACCTG CTCGCCGCCG GGGCCGCGCC GATCTCCACC GGCCTGTACG CCGGTCCGCA CGACCTGACC GACGTGGTGG ACCCCGAAGC ACGCGCGCAC CTGGTCACCG CGTCCGCGAC CGGGCTGGAC CTGCGCGGCG TCCACGACCC GGTGGAGATC ACCGAGGCGC TGTGGCCCGC CGAGCCGATC GACCGGGCCT ACGACGCCGT GGAGGAGGCG CTCGCCGACG ACGAGGGGAC GCCGCTGGTG CGACGGCTGC GGCTCGCGGC GGCGCTGGAG GCCGCGATGC GCGAGGACCC GCTGATCCCG CCGGAGCTGC GCGCGCGCCC GTGGCGACCC GCCCTGGTGC GGGGCGAGTG GCTGGAGCGC TGGCGGGGGC TCGCCGACGC ACCGGTCTAC CGGGGCTGGC TGTGA
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Protein sequence | MDERITPRTV VEALLPDEGA VDLALVYDTA NAVGVADQPL RLTLRRMASA GELEQSGRGR AGRVRLTDQG RERLRRDRVG LALAFAQDAG EAPWDGRWWL AAISTPERER AVRDALRRDL LAAGAAPIST GLYAGPHDLT DVVDPEARAH LVTASATGLD LRGVHDPVEI TEALWPAEPI DRAYDAVEEA LADDEGTPLV RRLRLAAALE AAMREDPLIP PELRARPWRP ALVRGEWLER WRGLADAPVY RGWL
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