Gene Amir_4278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4278 
Symbol 
ID8328475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp5040280 
End bp5040879 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content77% 
IMG OID644944745 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003101978 
Protein GI256378318 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCCG ACCGGCCCGC CGAGGCCCCC CGCAGCCGCA AGCCCCGCGT GGACGCCGCG 
CGCAACCAGG AGGCGATCGT CGAGGCGGCG GCCCGCGTGC TGGCCGAGCA GGGCGCGGCC 
GTCGACGTGC GCGAGATCGC CCGGCTGAGC GGCGTCGGCA TGGGCACCCT GTACCGGCAC 
TTCCCCACCA AGGAGGACCT GGTCCGCACG ATCCTGCGGC GCGAGTTCCT GACCTGGGCG 
GCGTCGGCGC GCGAGGCGGC GGAGCGCGCG GAGGACCCGT GGGCGGCGCT GGCGGACTTC 
TTCCGGCAGG CGCTGAGCGG CTACGCCAGG CACCGCGCGA TCTCGGAGTG CTTCGCGCTG 
GCCTGGGCGG AGCCGGACGT GGAAGGGCTG GGCGAGTTGC GGGCGGTGAT CGGGGGGCTG 
ACCGCGCGCG CCCACGAGGC CGGGTCGCTG CGCCCGGACG CGAGCGCGGA CGACCTGCTG 
CTGCTCCTGG TGTCCCTGGG GCACGCCGCC CGGCTGACCG GGGACAGCGA CCCGGAGCAG 
GTCGAGCGGC TGCTGCGGGT GTCGCTGGAC GGACTGCGGC CGGGGCACGC GGAGCGGTAG
 
Protein sequence
MTADRPAEAP RSRKPRVDAA RNQEAIVEAA ARVLAEQGAA VDVREIARLS GVGMGTLYRH 
FPTKEDLVRT ILRREFLTWA ASAREAAERA EDPWAALADF FRQALSGYAR HRAISECFAL 
AWAEPDVEGL GELRAVIGGL TARAHEAGSL RPDASADDLL LLLVSLGHAA RLTGDSDPEQ 
VERLLRVSLD GLRPGHAER