Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4253 |
Symbol | |
ID | 8328450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 5011825 |
End bp | 5012421 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644944721 |
Product | Galactoside O-acetyltransferase |
Protein accession | YP_003101954 |
Protein GI | 256378294 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00506408 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAGGG ACTACTTCGC GGGCGACCCC AGGACCAACC GGGAGCGGAT GCTCGCGGGC GAGCTGTACA TCGCCGACGA CCCGGAGAGC GAGCGCATCG CGCGGCGGGC GCTGGCGCTG CTGGAGGAGT ACCGGGTGGC GTTCACCGCG AGCCGGGACG AGGAGGCGCG GCGGCTGCTC GCCGAGGTGC TGGGCGAGGT CGGCGAGGGA GTGGTGGTGA AGCCGCCGCT GTTCGTGGAC TACGGGGAGA ACATCCGGAT CGGGGCGCGG ACGTTCGTCA ACTACAACCT GACGGCGCTG GACGTCGCAC CCATCACGAT CGGCGAGGAC TGCCAGTTCG GACCGGGCGT GCAGCTGCTG ACCCCCACGC ACCCCGTGGA GCCGGAACCG AGGCGCGACA AGCTGGAGGC GGCGAAGCCG ATCACGATCG GGGACAACGT GTGGCTGGGG GGCGGGGTGG TGGTGTGCCC TGGGGTGACG ATCGGGGACA ACAGCGTGAT CGGCGCGGGG GCGGTCGTGA CGCGAGACGT GCCACCGAAC GCGGTGGCGG TGGGGAACCC GGCGCGGGTG GTGCGGGAGA TCGGGGTGGA GGGGTGA
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Protein sequence | MPRDYFAGDP RTNRERMLAG ELYIADDPES ERIARRALAL LEEYRVAFTA SRDEEARRLL AEVLGEVGEG VVVKPPLFVD YGENIRIGAR TFVNYNLTAL DVAPITIGED CQFGPGVQLL TPTHPVEPEP RRDKLEAAKP ITIGDNVWLG GGVVVCPGVT IGDNSVIGAG AVVTRDVPPN AVAVGNPARV VREIGVEG
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