| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4235 |
|---|
| Symbol | |
|---|
| ID | 8328428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 4986728 |
|---|
| End bp | 4987930 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644944699 |
|---|
| Product | cytochrome P450 |
|---|
| Protein accession | YP_003101936 |
|---|
| Protein GI | 256378276 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2124] Cytochrome P450 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.457806 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCGCGC CGCTGTTCGG CCCCGCGTAC CTCCACGACC CCCACCCGAC CCTGCGCGCC
CTGCGCGAGC AGGGGCCGGT GCACCGCTCC GCGCTGCCGA CCGGGTTGCC GGTGTGGGTC
GTCGTGGACC ACGCGTGCGC CCGCGCCGTG CTCGGCGACG AGCGGGTGGC CAAGGACTTC
CGGCGGCTCG GCGAGATCAT GAGCGGCAAG CTGGTCGAGG CCGGGCGGGA CCCGAGGCTG
TCCGCGCTGT TCCGGGACAA CCTGCTGGTC ATGGACCCGC CCGACCACAC CCGGCTGCGC
CGCCTGCTGG CCAAGGACTT CACCGCCCGG CGCGTGGAGC GGCTGCGCCC CAGGGTGGAG
GCGCTCACCG CCGAGCTGCT GGACGCGCTG CCCACCACCA CCGAGGTCGA CCTGGTGGAG
CGGTTCGCGC TGCCGCTGCC GATGACGGTG ATCTGCGAGC TGCTCGGCGT GCCCGAGGAC
GCCCGGCCGT CGATGCGCCG CTGGTCCCAG GAGCTGATGG GCGAGTTCGG CCAGGCCGAC
GCGCTGCGGG CGTCCGAGGA GATGCCCGCC TACCTGCGGG GGCTGATCGC CGACCGGCGC
GCCTCCCCCG GCGACGACCT GCTGTCCGCC CTGACCAGGG CCGCCGACGA CGGGGACCGG
CTCACCGAGG CCGAGCTGCT GGGCACCTGC CTCGTCCTGG TGGTCGCCGG GCACGAGACC
ACCGCGGGGC TGATCAGCTC CAGCGCGGAC CTGCTGCTGC GCGAGGAACC CGTGCGCGGG
CTGCTCGTGG AGCGCCCCGA CCTCACCCGC CGCGCCGTGG ACGAGCTGCT GCGGCTGACC
AGCCCGGTCG CGATGACCAC CGCCCGGTTC ACCACCGAGG ACGTCGAGGT CGGCGGCACG
GTCATCCCCG CCGACGAGAT CGTCCTGGTG AGCCTGCCCT CGGGCAACCG CGACGCGGCC
CGCTTCCCCG ACCCCGACGA GTTCCGGCTC GACCGGGCCG ACGGCGGGAA CCTCGCGTTC
GGCCACGGCG TCCACTTCTG CGTCGGCGCG CCGCTGGCCC GCCTGGAGGC CGAGGTGGCG
CTGCGCGGGC TGCTGGATAG GTTCCCGGAC TTCCGCCGCT CCGGCAGCCC GGACGACCTG
GTGCGCAGGC GCTCCCAGAC GGTCACCGGC TGGCGTTCGC TGCCCGTGCT GCTCAACCCC
TGA
|
|---|
| Protein sequence | MIAPLFGPAY LHDPHPTLRA LREQGPVHRS ALPTGLPVWV VVDHACARAV LGDERVAKDF
RRLGEIMSGK LVEAGRDPRL SALFRDNLLV MDPPDHTRLR RLLAKDFTAR RVERLRPRVE
ALTAELLDAL PTTTEVDLVE RFALPLPMTV ICELLGVPED ARPSMRRWSQ ELMGEFGQAD
ALRASEEMPA YLRGLIADRR ASPGDDLLSA LTRAADDGDR LTEAELLGTC LVLVVAGHET
TAGLISSSAD LLLREEPVRG LLVERPDLTR RAVDELLRLT SPVAMTTARF TTEDVEVGGT
VIPADEIVLV SLPSGNRDAA RFPDPDEFRL DRADGGNLAF GHGVHFCVGA PLARLEAEVA
LRGLLDRFPD FRRSGSPDDL VRRRSQTVTG WRSLPVLLNP
|
|---|
| |