Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4195 |
Symbol | |
ID | 8328388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 4941518 |
End bp | 4944778 |
Gene Length | 3261 bp |
Protein Length | 1086 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644944659 |
Product | peptidase S8/S53 subtilisin kexin sedolisin |
Protein accession | YP_003101896 |
Protein GI | 256378236 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1404] Subtilisin-like serine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0130517 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTCTCC GGAAAGCGCT CTCCGCCGGG GTGGTGGCGG CGGTCGTGGC GGCGGCGCTC ACCGCGACCG TCCCCACGGC CGCGGCGGGC CCCGAGACCG GCCGGGACGC GCCAGGCGCG GCCGGGACCG GCACTGCCAG CGCCTCCACG ACCGGCGCCG CCACGACCGA CGTCTCTACG ACCAGCGCCT CCACGACCGG CGCCGCCACG ACCGGCGGCC AACGGCCGCG CGGCGTGGTG ACCCTCCTGA CCGGCGACGT CGTCGCCGTC GGCGGCGACG ACGTCCGGGT CACCCCCGGC GCGGGCCGGG AGAAGATCGT GTTCCACCGC TCCGGCGGCC CGGACGTCCT GCGCGTGATC CCCTCCGACG TGGCGGCGGA CGTCGCCTCG GGCAGGCTGG ACCGCGCCCT GTTCGACGTC GCGGGCCTGA TCGCCCAGGG CTACGACGAC GCCCGCACCG ACCACCTGCC GCTGATCGTC ACCGGCGCGC CCGACGCCGT CCGCCCCGCC GGGGACGCCG TCCGCGAGCT GCCCAGCGTC GACGGCTACG CGCTCGACGT CCCCAAGTCC CGCCCGCTGC TCGCCTCCGC CGCCGAGCAG GTCCCCGGCC GGATCTGGTT GGACGCCAAG GCCCGCACCA CCCTGGACCG CACCGCCGCG CAGATCGGCG CGCCCGCCGC GTGGGCCGCC GGCCTGACCG GCGCGGGCGC GAAGGTCGCG GTCCTGGACA CCGGCGTCGA CGCGGCCCAC CCGGACCTGG CAGGCGCGGT CGTGGAGTCC GCGAACTTCA GCGACAGCGC CGACGCGGGC GACCGCGACG GCCACGGCAC GCACGTCGCC TCCACCATCA CCGGCTCCGG CCGGTACCGG GGGATCGCGC CGGACGCGGT GATCCTCAAC GGCAAGGTCC TGGACGACCG CGGCGGCGGC GCCTACTCGT GGATCATCGC CGGGATGGAG TGGGCCGCGC CCCGCGCCGA CGTGGTCACC ATGAGCCTGG GCGCCCCCGC GAGCGAGGAC GACCCGCTGA CCCTCGCGCT CGACCGGCTC ACCGCCGAGA CCGGCGCGCT GTTCGTGGTC GCGGCGGGCA ACTCCGGTCC GCGCGCCTCC ACGGTCGGCA GCCCCGGATC GGCGGCGTCC GCGCTGACCG TGGGCGCGGT CGACCGGGAC GACGTGCCGG CCCCGTTCTC CTCGCGCGGC CCCGGCCCCG ACGAGCGCGT GCTCAAGCCG GACGTCACCG CGCCCGGCGT CGGCGTCGTG GCGGCCGAGG CGGGCTCGCC GGACGGGCAC GTCGCCATGT CCGGGACCTC GATGGCCGCC CCGCACGTCG CGGGCGCCGC CGCGATCCTG GCGCAGCAGC ACCCGGACTG GCTGGCCCCG CAGCTCAAGG CCGCCCTGAT GGGCACGGCC GTCGACCCGA AGGGCGCGAC CGTCTACGAG CAGGGCGCGG GCCGCGTCGA CCTGGCCCGC GCCACCACCA CCCCGCTGCA GGCCGACCCG CCGTCGCTGG GGCTGGGGAC CCTGCGCTTC CCGCACGACG ACGGCGAGCA GCCGTCCCCG CGCACCGTCA CCTACCGCAA CACCGGGGAC CAGCCGGAGG AGGTCGCGCT GACCGCCGTC CTGCGCGACC CCTCCGGCGC CGAGATCCCC GGCGCGGTCT CGGTGTCGCC GTCCTCGGTC ACCGTCCCGG CGGGCGGCTC CGCCGAGGTC GTCGTGACCA CCACCCTGCC CGCCGGCTCG CCGATCGGCG CGTACAGCGG CGTGCTGCTG GCCGGGGACG CGGTGCGCGT CCCGATCGGG CTGACCCGCG AGGGGGAGAT GCGCGACCTG CCGGTCCGGG TCCTCGACCA CGAGGGCGGG CCCGCGTCGA TGTACACGTT CTGGCTGCTC AACACCGCCA CCGGCGAGGA GCACAGGATG TTCGGCCCGT CCGGCTCCAC CACCGTCCGG CTGCCCGTCG GCGACTACCT GATGCACGCG GTGATCGTCC TGGGTGAGAA GGCCACCACG TTCGTCGAAC CCGCCCTGCG GATCGACGGC TCCTCGGTGC TGGAGCTGGA CGCCCGGCGC GGCGTGCCGA TGCGGGTCGC GGTGGACGAG CCCGGCGCGG TCCCCGCCGC GGTCGGCGTG GCCCTCACCA TGGACGTGCT GGGCAGGCCA GCGCACGCGA GCTCCTTCAG CTACGCCCCC GAGACGATGC TCTTCGTGCC GTCGAGCACC ACCTCCGAGG CGGCCAAGAC CACCCTGGAG CACGCGCTGG TCCCGCCCGA GGGGTTCACC GGCCTGCCCT ACCAGTACGC GCTGAAGTGG GCGGTCGAGG GTGGTGTTCC GCACGACCTG AGCCGGGAGT TTCGCAAGCG CGACCTGGCG CACGTGAACG CCGCCGTCGC CTCCGGGGGC AGCGGGAACG TGGTGCAGCA CGACCTCCTC ACCACGCTGG CCACACCGCA CGCGATCCTG CTGCACTACA GCCCGGACGT GCCGTGGCGG CACCGGACTG ACCTCTGGTC CGAGCAGGGC GGCAGCGGCA AGGGCACCCA GGAGCACGTG AAGGACGTGG TCTACCGCAA GGGCCAGGTG CTGAGCGAGT CCTGGTACCG GGGTGTGCTC GGCCCGGCAT TCCCGGAGAT CGGCGAGGGG GACGTGCCCC ACGCCTCGCG CCGGCGTGAC CAGTTCCTCT ACTGGGTTCC GCTGTTCACC GACCAGGCCG CCAACCACAA GGGCGGCCGG GACTACAGCA CCGAGCACGT CGTGCTCACC CGCGACGGTG AGGTGCTGCT GGACGAGCTG CGGCGGGGCC AGCACCTGCT GGCGCGGATG CCCCAGGACC CGGGGGACTA CGAGCTGAGC GTCGACGCGT CCAGCGGCGT CGGGTTCGAC CTGTCCACGC GGGTGAGCGC GAAGTGGCGC TTCCACTCCG AGCAGACCCA GGCGGAGGAG GCGGTGCCGC TGCTGGCGGT GCGGTTCGCG CCGGACCTCG ACCAGCGCAA CCGGGCGCCG CGCGGCCGGG TCACGATCCC GGTCTCGGTG CAGCGCAACG GGAGCGCGGA CGTGTCGGAC GTGCGCAGGC CGAGCGTGGA GGTCTCGTAC GACGACGGCA GGACCTGGCG GGCGGCCCCG GTGAGCGGCC GGGACGGCGA GTGGTCGGTG ACGACCGCGA GCCCGCCGGG GGCGGTGTTC GCGTCACTGC GATCGTCCAC TTCGGACTCG TCCGGGAACT CGTTGGTGCA GACCATTATC CGGGCGTACG CGCTGCGCTG A
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Protein sequence | MPLRKALSAG VVAAVVAAAL TATVPTAAAG PETGRDAPGA AGTGTASAST TGAATTDVST TSASTTGAAT TGGQRPRGVV TLLTGDVVAV GGDDVRVTPG AGREKIVFHR SGGPDVLRVI PSDVAADVAS GRLDRALFDV AGLIAQGYDD ARTDHLPLIV TGAPDAVRPA GDAVRELPSV DGYALDVPKS RPLLASAAEQ VPGRIWLDAK ARTTLDRTAA QIGAPAAWAA GLTGAGAKVA VLDTGVDAAH PDLAGAVVES ANFSDSADAG DRDGHGTHVA STITGSGRYR GIAPDAVILN GKVLDDRGGG AYSWIIAGME WAAPRADVVT MSLGAPASED DPLTLALDRL TAETGALFVV AAGNSGPRAS TVGSPGSAAS ALTVGAVDRD DVPAPFSSRG PGPDERVLKP DVTAPGVGVV AAEAGSPDGH VAMSGTSMAA PHVAGAAAIL AQQHPDWLAP QLKAALMGTA VDPKGATVYE QGAGRVDLAR ATTTPLQADP PSLGLGTLRF PHDDGEQPSP RTVTYRNTGD QPEEVALTAV LRDPSGAEIP GAVSVSPSSV TVPAGGSAEV VVTTTLPAGS PIGAYSGVLL AGDAVRVPIG LTREGEMRDL PVRVLDHEGG PASMYTFWLL NTATGEEHRM FGPSGSTTVR LPVGDYLMHA VIVLGEKATT FVEPALRIDG SSVLELDARR GVPMRVAVDE PGAVPAAVGV ALTMDVLGRP AHASSFSYAP ETMLFVPSST TSEAAKTTLE HALVPPEGFT GLPYQYALKW AVEGGVPHDL SREFRKRDLA HVNAAVASGG SGNVVQHDLL TTLATPHAIL LHYSPDVPWR HRTDLWSEQG GSGKGTQEHV KDVVYRKGQV LSESWYRGVL GPAFPEIGEG DVPHASRRRD QFLYWVPLFT DQAANHKGGR DYSTEHVVLT RDGEVLLDEL RRGQHLLARM PQDPGDYELS VDASSGVGFD LSTRVSAKWR FHSEQTQAEE AVPLLAVRFA PDLDQRNRAP RGRVTIPVSV QRNGSADVSD VRRPSVEVSY DDGRTWRAAP VSGRDGEWSV TTASPPGAVF ASLRSSTSDS SGNSLVQTII RAYALR
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