Gene Amir_4182 details

Gene Information

• Locus tag: Amir_4182
• ID: 8328375
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 4920537
• End bp: 4922609
• Gene Length: 2073 bp
• Protein Length: 690 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 644944646
• Product: AAA ATPase
• Protein accession: YP_003101883
• Protein GI: 256378223

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGGACA TCAGGAACGT GGTCAGCGGC GCGGCGCACG TCGTCGTGCA GGCCGGGAAC 
ATCGAGTTCG GGCTGCCCGC CCCGCGTCCG CCCATGCAGC TGCCCGGCTG GCAGGGCGCG 
CTGTTCAACC AGCGGCAGGC CCAGGCGGCG CTGTCCGGGG CGTTACCCGA GGGCGGGGCG 
GGGCTGCTGT GCGTGTCCGG GCAGCCGGGT GTCGGCAAGT CCGCGCTGGT CGTGCACTGG 
GCGCGGCGCA ACCTGGCGCA CTTCCCCGAC GGCGTCCTGT ACGCGGACCT GCGCGGCCAC 
AACCCGGCCA CCACGCCCGC CGAACCCGGC GAGGTGCTCG ACCCGTTCCT GCACGCCCTG 
GGCGTCCCCG GCCTCGGCGG CGTCGAGGAC CGGGCCGCCC AGTACCGCAG CGCGCTCAGC 
GGCAAGCGGG TGCTGGTCGT GCTCGACGAC GCCACCAGCG CCGAGCAGGT CCGGCCGCTG 
CTGCCGGGCG GGCGCTCGGT CGTGGTGGTG ACCAGCCGGT CGCGGCTGCG CGGCCTGGTC 
GTGCGCGACG GCGCCGTCGA CGTCCCCCTC GGCCCGCTCT CGCTCGCCGA GGCGGTGGCG 
CTGATCGTGG AGCGCAGCGA CGGCGTGGGC GTGGCCGACG ACCCGGCGAC CGAGGTGCTG 
GCCCGGCGCT GCGGCTGCCT GCCGCTGCTG CTGCTCATCG CGGCCCAGCG GATCGACGGC 
TTCACCTTCT CCACGGCCGC CGAGCTGGCC GGGGAGCTTG CCGAGAAGGC GGTGTTCGCG 
GTGCTCAGGG ACGATGGGGA CGTGGTCGGC GTGTCCTACC GCAGGCTCGC GCCCGAGCAG 
GCGCGGGTGT TCCGGCTGCT CGGGCTGCTT CCCGGCGCCA CCGCGACCCC GGAGGCGGTC 
GTCGCGCTGA CCGGGCTTCC GCTCGGGGCC GTGCGGGAGG CGCTCGGGGC GCTGTGCCTG 
GCGAACCTGC TGGAAGTCGT CGTGGCCGGG CAGCGGTTCC AGCTGGTCAG CCCGCTGCGC 
GAGTACGCGG CCGAGCGCGC CGACGAGGAG GAGGACGCGC AGGAGCGGTT CGAGGCGGTG 
TCGCGGGTGC TCGGGTGGCA CCTCGCGAGC GCGCTGGCCG CAGACCGGGC GCTGGGAGCC 
GCGCGGGCAG GTGTCATCTT TTCGGGGTCC GGTCGACCGT TCGCGGATGC GGGCGAGGCG 
GGCAGGTGGC TCGCCTCCGA GCGGGTCAAC CTGGTGGCGT GCGCGCGGCG GGCCGCCGAG 
CTGGGTGAGC ACGGGGTGGC GTGGCGGTTG GCGGTCGCGC TGTTCGAGCA CTGCTACCGG 
GTGAAGGCGT GGGACGACTG GATCACCGTG CACGAGATCG GGCTGGCGTC GGCGCGGGCT 
TCCGGTGAGG CCGTCGCGGT GGCGCTGGTG CTTGGCGGGC TCGGGGTGGC ATTCCGGGAG 
CGGCGCGAGC ACGGGCGCGC GGAAGAGTGC TTCCGGGAGG CGCTGGAGAT CCACGAGGGC 
GTGCGGGACG AGCGCGGCAT CGGGTGGGTC GCGATCCGGT ACGCGCAGCT GTGCCGTGAG 
CTGGGGCGCG GTGGTGAGGC GGTGGCGCTG GCGTTTCGGG CGCTCGACGT GGCCGAGCAC 
GGGGGGGACC GGCAGAGGGC CGGGGAGGCG CGCAACAGCT TGAGCGGGCT GCACCGGGAA 
GCCGGGCGGA CGGCCGAGGC GCTGGCTCGC GCGCAGGAGG CGCTCGTGGA CTTCACCGCC 
GCGGGGTCGG CGCGGAGCGT GGCGTGGGCG CGGCTCAGCG CGGCGAACGC GCTGCGGGAC 
GCGGGGCGGT TCGCCGAGGC GGTGGAGCTG TACGCGCTGG TGCGCGAGGC GCGGCGGGCG 
CCGGGGGAGG AGTACGGGCT GGCGCTGGTG CTCGCGGAGT TGGGGTACGC GCGATGCCTG 
TCCGGTGACG TGGCGGTCGG GCTGGCGGAG CTGCGGGAGG GCTTGGCGCT GCTCCCCGAG 
GCGGACGCCG TCCGCGAGCG GGTCCTCGGC TGGATCGAGC GCTTCACCGC CCCCGACGAG 
GCCGACCCGA CCGGTGACCG GCCTGGCCCG TGA 

 

Protein sequence

MKDIRNVVSG AAHVVVQAGN IEFGLPAPRP PMQLPGWQGA LFNQRQAQAA LSGALPEGGA 
GLLCVSGQPG VGKSALVVHW ARRNLAHFPD GVLYADLRGH NPATTPAEPG EVLDPFLHAL 
GVPGLGGVED RAAQYRSALS GKRVLVVLDD ATSAEQVRPL LPGGRSVVVV TSRSRLRGLV 
VRDGAVDVPL GPLSLAEAVA LIVERSDGVG VADDPATEVL ARRCGCLPLL LLIAAQRIDG 
FTFSTAAELA GELAEKAVFA VLRDDGDVVG VSYRRLAPEQ ARVFRLLGLL PGATATPEAV 
VALTGLPLGA VREALGALCL ANLLEVVVAG QRFQLVSPLR EYAAERADEE EDAQERFEAV 
SRVLGWHLAS ALAADRALGA ARAGVIFSGS GRPFADAGEA GRWLASERVN LVACARRAAE 
LGEHGVAWRL AVALFEHCYR VKAWDDWITV HEIGLASARA SGEAVAVALV LGGLGVAFRE 
RREHGRAEEC FREALEIHEG VRDERGIGWV AIRYAQLCRE LGRGGEAVAL AFRALDVAEH 
GGDRQRAGEA RNSLSGLHRE AGRTAEALAR AQEALVDFTA AGSARSVAWA RLSAANALRD 
AGRFAEAVEL YALVREARRA PGEEYGLALV LAELGYARCL SGDVAVGLAE LREGLALLPE 
ADAVRERVLG WIERFTAPDE ADPTGDRPGP