| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4151 |
|---|
| Symbol | |
|---|
| ID | 8328344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 4883864 |
|---|
| End bp | 4884826 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644944615 |
|---|
| Product | Ricin B lectin |
|---|
| Protein accession | YP_003101852 |
|---|
| Protein GI | 256378192 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCGCT GGTTGTCCGT CGCGTGCGCG ATCGCGCTGC TGCCGCTCGG GGCGCCCGGC
GCCTCGGCCG CGGAACCCGA CATGTCGGCC CCGGAGCGGG CCGTGCCCGA GAAGACGGGT
GTGATCGTCG ACGGCGGCAG CGGCAACCGG GCCTCGCTCG GCGCGACCAG CACCGGCAAC
ACCGTGGCCG GGAGGGTGTG GAACGACGAC GGTGACGGCG TGCGCCAGGA CCACGAGTCG
GCCGCGCAGC TGGAGATCCG GCTCTGGACG CACCACCCCA CCGCGGGCTG GAGCGCCGTC
CGGGTCACCT CCTACGGCGG GGCGTACGCG TTCACCGACG TTCCGCCGGG CAGCTACCAG
GTCCAGGTGT GGGTCCCCGC GTCGAGCCCC GAGGCGGTGA CCCGGTTCGG CGCGGGCGGC
GACCGGCAGC GCGACTCCGA CGTGCTCGGC CCGAACGCCG AGAGCCTGCC CGTGGTGTTC
GCGGACGGCG GGCCCGAGAC CAGGGGGGTG GACGCCGGCC TGGTGCCGGG ACGGTCGACC
GGGAACTCCG TCAAGAGCGC CGCCAACCAC TGGTGCCTGG ACCAGGAGGC CCCGAACGGG
CTGCCGCCCA CCGCGGGCGT CGGCGCCTAC CGCTGCCACG GCGACCGGAA CCAGAAGTGG
TACTTCTACT GGATCACCAC CGAGGTGGTG GAGGTGTGGG GCGGCTGGAA CTGGGACTGC
CTCGACCAGG AGTTCCCCGG TGACCAGAAG ACCAGCGAGG TCGGCGTGCA CCCGTGCCAC
GGCGGCGTGA ACCAGCGCTG GCGGGTGTAC CACAACGAGC TGCAGGGCGA GCCGATGACC
GTCGCCAACG TGCGCACCGG CGAGTGCCTG GACCAGGAGT CCCCGCAGGG CCCGCCCACC
AGCGGGGTGG GCGTCCACGC GTGCCACGGC GGGCTGAACC AGAAGTGGTA CGTGGCGGAC
TGA
|
|---|
| Protein sequence | MRRWLSVACA IALLPLGAPG ASAAEPDMSA PERAVPEKTG VIVDGGSGNR ASLGATSTGN
TVAGRVWNDD GDGVRQDHES AAQLEIRLWT HHPTAGWSAV RVTSYGGAYA FTDVPPGSYQ
VQVWVPASSP EAVTRFGAGG DRQRDSDVLG PNAESLPVVF ADGGPETRGV DAGLVPGRST
GNSVKSAANH WCLDQEAPNG LPPTAGVGAY RCHGDRNQKW YFYWITTEVV EVWGGWNWDC
LDQEFPGDQK TSEVGVHPCH GGVNQRWRVY HNELQGEPMT VANVRTGECL DQESPQGPPT
SGVGVHACHG GLNQKWYVAD
|
|---|
| |