Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4132 |
Symbol | |
ID | 8328325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 4860686 |
End bp | 4861909 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644944596 |
Product | Mandelate racemase/muconate lactonizing protein |
Protein accession | YP_003101833 |
Protein GI | 256378173 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0168136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGATCG TGTCGGCCGA GGTCGTGGTG ACCTCACCGG GTCGGAACTT CGTGACGTTG CGGATCACCA CCGAGGACGG GCTGTCCGGG CTGGGCGACG CGACGCTCAA CGGGCGCGAG CTGGCGGTGC GGGCGTACCT GGTGGAGCAC GTCGTGCCGC TGCTGATCGG GCGGGACGCG TCGGCGATCG AGGACACCTG GCAGTACCTG TACCGGGGCG CGTACTGGCG GCGCGGGCCG GTGACGATGG CGGCGATCGC GGCGGTGGAC ACGGCGCTGT GGGACGTCAA GGCGAAGGCC GCGGGGATGC CGCTGTACCA GCTGCTCGGC GGGGCGTGCC GGGTGGGCGC GCTGGCGTAC GGGCACGCGT CGGGGCGGGA CCTGCCGGAG CTGTTCGACT CGATCCGGGC GCACCTGGAG CGCGGGTACC GGGCGATCCG GGTGCAGACC GGGGTTCCGG GGCTGGGCGT GGTGTACGGG GTGGCGGCGT CGGTGGGCGG CGAGCGGTAC GACTACGAGC CCGCGCGGCG GACGGCGCTG CCGGTGGAGG AGGAGTGGGA CACCAGGGCG TACCTGCGGC ACGTGCCGGG GGTGTTCGAG GCGGTGCGCG CGGAGTTCGG CCCGGAGCTG CCGCTGCTGC ACGACGGGCA CCACCGGATG ACGCCGGTCC AGGCGGCGCG GTTGGGGAAG TCGCTGGAGC CGTACGACCT GTTCTGGCTG GAGGACGCCA CGCCCGGTGA GGACCAGGCG GCGCTGCGGC TGATCAGGCA GCACACGACG ACGCCGCTGG CGATCGGCGA GGTGTTCAAC TCGGTGCACG ACTACCAGGG GTTGATCACC GAGCGGTTGA TCGACTACGT GCGGTCGGCG GTGACGCACA CCGGTGGGGT GACGGGGATG CGGCGGCTGC TGGACTTCGC CGGGGTGTAC GGGATCAAGT CGGGCATCCA CGGGCCGACG GACATCTCGC CGGTGGGGAT GGCGGCGGCG CTGCACCTGG ACCTGGCGGT GCACAACTTC GGCATCCAGG AGCACATGGA GCACACGGCG CGGACGCTGG AGGTGTTCCG GACGTCGTTC ACCTTCGCGG ACGGGCTGCT GCACCCGTCG GACGCGCCGG GGTTGGGGGT GGAGCTGGAC GACGAGATGG CGGGGGCGTT TCCGTACGAG GCGGCGTACC TGCCGGTGAA CCGGCTGCGG GACGGGACCG TGCACGACTG GTGA
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Protein sequence | MRIVSAEVVV TSPGRNFVTL RITTEDGLSG LGDATLNGRE LAVRAYLVEH VVPLLIGRDA SAIEDTWQYL YRGAYWRRGP VTMAAIAAVD TALWDVKAKA AGMPLYQLLG GACRVGALAY GHASGRDLPE LFDSIRAHLE RGYRAIRVQT GVPGLGVVYG VAASVGGERY DYEPARRTAL PVEEEWDTRA YLRHVPGVFE AVRAEFGPEL PLLHDGHHRM TPVQAARLGK SLEPYDLFWL EDATPGEDQA ALRLIRQHTT TPLAIGEVFN SVHDYQGLIT ERLIDYVRSA VTHTGGVTGM RRLLDFAGVY GIKSGIHGPT DISPVGMAAA LHLDLAVHNF GIQEHMEHTA RTLEVFRTSF TFADGLLHPS DAPGLGVELD DEMAGAFPYE AAYLPVNRLR DGTVHDW
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