| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4128 |
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| Symbol | |
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| ID | 8328321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 4853202 |
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| End bp | 4856597 |
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| Gene Length | 3396 bp |
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| Protein Length | 1131 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644944592 |
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| Product | helicase domain protein |
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| Protein accession | YP_003101829 |
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| Protein GI | 256378169 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.33452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGGCTTG AGGAACTGGT GGGCGGCGTC CGGGTGACCG GGGTCGTGCC TGGCGAGGCG
GTCCTCGTGA TCGCGGCCCT GAAGAGCGGC CCCAACGCGG TGCACCTCTA CTTCGAGCCC
TCCTCCGGGG TCCCGGACCA GCGGATGCTG TTCCGCGAGG ACGAGGCGAA CCTGGCCAGG
GCCGAGTCGG GCGGCAGGCC GCTGGACGCG GACCCGCTGG AGTTCCGGCT GGTCGCCGAG
GCGCAGCGGA TCTCGCTGGC GGGTCTGTTC GACCCGATGC CCGCCGTGGC CACCAGTGAC
GTGCGACCGC TGCCGCACCA GATCCGCGCG GTGTACGGGG AGCTGCTGGA GCGGCGCCCG
CTGCGGTTCC TGCTGGCCGA CGACCCCGGC GCGGGCAAGA CCGTCATGGC CGGGCTCTAC
CTCAAGGAGC TGCTGCTGCG CGACGACGTG CGGCGCTGCC TGGTGGTCGT GCCCGGCGGC
CTGGTGGACC AGTGGCAGGA CGAGCTGTTC CTGAAGTTCG GGCTGGGCTT CGAGGTGCTG
TCCCCGTCGA TGGCCGACGC CGCGCTCGGC TCCGGGGTGT TCGCCAAGCA CCCGCTGCTG
ATCGCCAGGA TGGACCAGCT GGCGCGCAAC GAGCAGCTGT CCGCGCAGCT CGACGAGGCC
GAGTTCGACC TGGTCGTGGT GGACGAGGCG CACCGGATGG GCGCGCACCA CTTCGGCGGG
AAGGTCAACC GCACCAAGCG GTTCCAGCTC GGTGAGCGGC TGCGCGACCG CACGCGGCAC
CTGCTGCTGA TGACCGCGAC CCCGCACTCG GGCAAGGAGG AGGACTTCCA GCTGTTCCTC
ACCCTGCTCG ACCCCGACGG GTTCGAGGGC AGGCCGGACG GGCGGGGTGT GGACACCACC
GGGATGATGC GGCGCATGGT GAAGGAGGAC CTGCTCACCT TCGAGGGCAG GCCGCTGTTC
CCCGAGCGGG TGGCCGAGAC CGTGCCCTAC CGGTTGTCCG AGCACGAGCA GGACCTGTAC
GAGCAGGTCA CCGAGTACGT GCGGGAGGGC ATGAACCGGG CGGAGCGGCT GGAGGACAAG
CGGCGCAACA CGGTCGGCTT CGCGCTCACC GTGCTCCAGC GCAGGCTGGC GTCGAGCCCC
GAGGCGATCC ACCGGTCGCT GGTGCGTCGC TCGCAGCGGT TGGAGCGGCG CAGGGCCGAC
CTGCTGGCGG GTCGGGCGAC GCCGGAGCCC GGACCGGTTC CGGCGACCGC GCTGCACGGT
TGGGACGACG ACGAGCACAC CGCCGAGGAG GTGGAGCGCG TCGAGGAGGA GATGGTGGAC
GCGGCCACCG CGGCGCGCAC CGCCGCCGAG CTGGCCGCCG AGCTGGCCGA GCTGGGCGCG
CTGGTCTCGG CCGCGCGCCG GGTGTGCGAG CTGGACACCG ACCGCAAGTG GGTGGAGCTG
CGCCGGATCC TGCAGGACAA CGACCTGATC CACCCGGACG CGCGGCAGGC GCGCAAGCTG
ATCGTGTTCA CCGAGCACCG CGACACCCTC GACCACCTGG ACCGCAAGAT CGGCGCGCTG
TTCGGCGCGC CCGGCTCGGT CCTGGCCATC CACGGCGGGG TGAACCGGTT CAGGCGCAGG
GAGATCACCG AGGAGTTCAC CGCGAACCCG GCCTGCCGGG TGCTGCTGGC CACCGACGCG
GCGGGCGAGG GCCTGAACCT GCAGGCGGCG CACATGGTGG TCAACTACGA CCTGCCGTGG
AACCCCAACC GCATCGAGCA GCGGTTCGGC CGGGTGCACC GCATCGGGCA GACCGAGGTG
TGCAGGCTGT GGAACCTGGT GGCGGTGGGC ACCCGTGAGG GCGAGGTGTT CGCGACGCTG
CTGCGCAAGG TGGAGGAGCA GCGCAAGGCC TACGGCGGCA AGGTGTTCGA CGTGCTCGGC
TCGGCGTTCG ACGAGACGCC GCTGCGGGAC CTGCTGATCG CGGCGATCCG GTACGGGGAG
CGGCCGGAGA CCCGCGAGCG GATGGAGCGG GTCATCGACG ACTCGGTGTC GCACGGGTTG
ACCGAGCTGC TGCGGGAGCA GGCGCTGGCG CACGACGTGC TGCCGGGTGA GCAGCTCGCG
CGGCTGCGCC GGGACATGGA GGAGGCGCGG GCGCGCAGGT TGCAGCCGCA CTGCGTCGAG
TGGTTCTTCC GCAACGCCTT CCAGCGGTTG GGCGGGCGGT TGGTCAAGCG GGAGAAGGGG
CGGTTCGAGA TCACCGGCGT GCCCGCCGGG GTTCGGGCCG CGGGTGGGAC GGGGCCGGTC
GCGTCCGCCT ACCGGCGGGT GGTGTTCGAC CTGGACCGCG CCAGGGTGGA CGGCGCGCCG
GCGGCGGACC TGCTGGCGCC GGGGCACGGG CTGTACGACG CCGTCGCCAA GCTGACCGAG
CGGCAGCTGG CCCCGGCGCT GGAGCGCGGC ACGGTGCTGC TGTCCGCCTC GGTGGACCGG
CCGCAGCTGC TCGTGGGCGT CCGGGAGGAG GTCGTGGACG GCACCGGGGA GTCGATCTCC
CGCAGGTTCG GCTACGCGCT GGTCGACGAG ACGGGGACGA TCACCCCGGC GGGGCCCGCC
CCGTACCTGG ACTGCGTGGC CCCGCCGGAA CCGGTGGCGC GCCCGGACCT GTCGTGGCTG
GTCGACGCCG AGTCGCGGGC CCGCGACTGG ATCGCCGAGC ACCGGTTGCG GGAGTACCTG
GAGGAGGTCA GGGAGCGCAG ACTGGCCGAG GTGGGCCGGG TCAGGGACAA GGTGGAGCGG
AGGCTGACCG ACGAGTCCCG CCGCCTGCTG GCCGAGGCCG CAGAGGCCGA GGTGCGGGAG
CGCGCCGGGC TGAGGCCCAA GGAGAGCTCC GAGGGGTTGC GGCGCAAGTC CGACGAGCTG
CTGGCGCGCC GGGAGGACCG CCTGGCGCTG TTGGACCGGC AGGTCGCGCT GAACGCCCTC
CCGCCCAGGA TCATGACCGC CGCGCTGGTG CTGCCCGTGG CGGGTGCGGG CGCGCCGTCC
GCGCCGAGCA AGGCGGTGGA GCGCAGGGGC GTGGAGCTGG TGCTCGCCAC CGAGCGGGCG
CTGGGGCGGT CGCCGGAGGA GAAGCCCTTC AGCAACCCCG GCTACGACGT GCTGTCGACG
CCCCCGGACG GCGGGCCGTC GATCCGGATC GAGGTGAAGG CCCGCGCGGC GGGCGCCGAG
GACTTCCAGG TGACGCACAA CGAGGTGATC ACGGGGAAGA ACGCGGCGCC GCACTACCGG
CTGGCACTGG TGTCGGTCAG CCCGGACGGG CCCGAGCACG ACCTGGTGCG CTACGTGGCG
GAGCCGTTCT CGGGCGTGGA CTTCGGCGAC CTCGCCGCCA CCGGGGTGCG GGCGGACTGG
GCGCGGACCT GGGCGTCGGG TTCGGAGCCG TTCTGA
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| Protein sequence | MRLEELVGGV RVTGVVPGEA VLVIAALKSG PNAVHLYFEP SSGVPDQRML FREDEANLAR
AESGGRPLDA DPLEFRLVAE AQRISLAGLF DPMPAVATSD VRPLPHQIRA VYGELLERRP
LRFLLADDPG AGKTVMAGLY LKELLLRDDV RRCLVVVPGG LVDQWQDELF LKFGLGFEVL
SPSMADAALG SGVFAKHPLL IARMDQLARN EQLSAQLDEA EFDLVVVDEA HRMGAHHFGG
KVNRTKRFQL GERLRDRTRH LLLMTATPHS GKEEDFQLFL TLLDPDGFEG RPDGRGVDTT
GMMRRMVKED LLTFEGRPLF PERVAETVPY RLSEHEQDLY EQVTEYVREG MNRAERLEDK
RRNTVGFALT VLQRRLASSP EAIHRSLVRR SQRLERRRAD LLAGRATPEP GPVPATALHG
WDDDEHTAEE VERVEEEMVD AATAARTAAE LAAELAELGA LVSAARRVCE LDTDRKWVEL
RRILQDNDLI HPDARQARKL IVFTEHRDTL DHLDRKIGAL FGAPGSVLAI HGGVNRFRRR
EITEEFTANP ACRVLLATDA AGEGLNLQAA HMVVNYDLPW NPNRIEQRFG RVHRIGQTEV
CRLWNLVAVG TREGEVFATL LRKVEEQRKA YGGKVFDVLG SAFDETPLRD LLIAAIRYGE
RPETRERMER VIDDSVSHGL TELLREQALA HDVLPGEQLA RLRRDMEEAR ARRLQPHCVE
WFFRNAFQRL GGRLVKREKG RFEITGVPAG VRAAGGTGPV ASAYRRVVFD LDRARVDGAP
AADLLAPGHG LYDAVAKLTE RQLAPALERG TVLLSASVDR PQLLVGVREE VVDGTGESIS
RRFGYALVDE TGTITPAGPA PYLDCVAPPE PVARPDLSWL VDAESRARDW IAEHRLREYL
EEVRERRLAE VGRVRDKVER RLTDESRRLL AEAAEAEVRE RAGLRPKESS EGLRRKSDEL
LARREDRLAL LDRQVALNAL PPRIMTAALV LPVAGAGAPS APSKAVERRG VELVLATERA
LGRSPEEKPF SNPGYDVLST PPDGGPSIRI EVKARAAGAE DFQVTHNEVI TGKNAAPHYR
LALVSVSPDG PEHDLVRYVA EPFSGVDFGD LAATGVRADW ARTWASGSEP F
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