Gene Amir_4098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4098 
Symbol 
ID8328291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4816129 
End bp4816764 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content70% 
IMG OID644944563 
Productuncharacterized peroxidase-related enzyme 
Protein accessionYP_003101800 
Protein GI256378140 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0948482 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGCAA CGACCGAGGT CCGAGTCCCG ATGGTGGAGG AGGCGCAGGC CACCGGCCGC 
GTCGCCGAGC TGTACGCCGA GATCAAGCAG GCCACCGGGC TGCCGTTCGT GCCCGACATG
TTCCGGCTGA CCTCGTCCCG GCCGGACCTG CTGGAGGCGG TGGTCGCCGG TTACAAGGGC
ATGTACCTGG GCGGGGTGCT GCCCAGGCAG ACCCGCGAGC TGATCTCGGC GTGGACGTCG
AAGGTGAACC AGTGCCCGTA CTGCGTGGGC ACGCACAACT TCTTCTTCCG GGCGTTCGGC
GGGCCGGAGG AGACCGCGAA GGCGGTGGAG ACGGCGTCCG GCGTGGACGA GCTGCCGGTG
GACGAGCGCA CGAGGGTGCT GCTGCGACTG GTGACCAAGG TCAGCCGCGA GGCGTACAAG
ATCACCGAGG AGGACTGGCG GGTCGCGGGC GAGGCGGGGT GGAGCCGGGA GGAGCTGCTG
GAGGCGTTCT TCACCGCGTC GATGTTCAAC TTCATCACGC GCATGGTCGA CGGGCTGGGC
CTGGGCTACT CGGTCGCGGC CAGCCGGGTG TCCCAGCAGC CGGTGTCGCA GCAGCCGGTG
TCCCAGCAGG CCGCGCCGGG CGGCGGTGAC CGGTGA
 
Protein sequence
MDATTEVRVP MVEEAQATGR VAELYAEIKQ ATGLPFVPDM FRLTSSRPDL LEAVVAGYKG 
MYLGGVLPRQ TRELISAWTS KVNQCPYCVG THNFFFRAFG GPEETAKAVE TASGVDELPV
DERTRVLLRL VTKVSREAYK ITEEDWRVAG EAGWSREELL EAFFTASMFN FITRMVDGLG
LGYSVAASRV SQQPVSQQPV SQQAAPGGGD R