Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4018 |
Symbol | |
ID | 8328211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 4701286 |
End bp | 4701927 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 644944490 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_003101727 |
Protein GI | 256378067 |
COG category | [R] General function prediction only |
COG ID | [COG2910] Putative NADH-flavin reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.163335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCATCC TGGTGGTCGG GGCCAATGGC AGGCTTGGGC GGCGCGTGGT GGCGCGGGCG CTGGAGGTCG GGCACGAGGT GACCGCGTTC GCCCGCCGGG CCGACGGGCT GCCCGCCGAC CCCGCGCTCG CGGTCCGGGT CGGCGCGGTC GCCGAGTGGC CCGCCGAGGT CAGGGCCGCC GTCTCCGGGC AGGACGCGGT GATCGCCGCG CTGGGCGCAC CGCCGTGGAA CGTCCGGCGG CGCGGACCCG CGGCCGTCGC GTCCGCCGTG GCGAACCTGG TGGTCGCGAT GTGCGCGGAG GGGGTGCGGC GGATCGCCGT GCCGGTCGCC TGGGGCGCGG GCGTCAGCCG GGTGGCGGCC TCGCCGGTCC TGCGCGTGCT CGCCGCCACG GTGGTCCGCC GCGACTACCG GGACTACGGG GCGGCCGAGC GGGTGCTGAC CACCTCCGAG CTGGACTGGA CCCTCGCCTA CCTGGGCGCC CTCACCGATC GCGGCGCGTC CGGGTGGCGG GCCAGCACCG ACATCGGGCG ACCGCGCGCG CTGGGCCTGT CGCGCTCGGC GGCGGCGGAG TTCCTGGTGT CGGTGGTGGA GCGGGACGAC CTGGCGCGGC GGCGCGTCGT GCTGCACGGA GCGGCGCGGT GA
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Protein sequence | MRILVVGANG RLGRRVVARA LEVGHEVTAF ARRADGLPAD PALAVRVGAV AEWPAEVRAA VSGQDAVIAA LGAPPWNVRR RGPAAVASAV ANLVVAMCAE GVRRIAVPVA WGAGVSRVAA SPVLRVLAAT VVRRDYRDYG AAERVLTTSE LDWTLAYLGA LTDRGASGWR ASTDIGRPRA LGLSRSAAAE FLVSVVERDD LARRRVVLHG AAR
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