| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3927 |
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| Symbol | |
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| ID | 8328120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4608144 |
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| End bp | 4609454 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644944406 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003101643 |
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| Protein GI | 256377983 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCACAGAC CACCGACGTT CGCGCGCCGC CTGGCCCGCC TCTGCCTCGC CCTGCTCACC
GCCGCCGCCA CCGCCGTGGC GGTCGCGCCG CCCGCGCAGG CCGCCGCCGG GTACCTCTAC
ACCACCTTCA AGGGCGACGG CGCCGCCGAC CAGGAGCTGT GGGTCTACTC CTCCACCAAC
GGCACCAGCT TCAGCGCCTT CGCCGACACG AACTACCGCG GCCCGTCCGG CGTGCTGCGC
GACCCCAGCG TCATCCGGCA CAACGGGCTC TACTACGTCG CCCACACCGT CCAGTCGTGG
ACCACGAACT CCACCTACTT CAACATCGCC TCCAGCCCCG ACCTGCTCAC CTGGACGCAC
GTCGCCAGCG TCAACTCCGG CATCGCCAAC ACCCGGTTCA CCTGGGCGCC CGAGTTCTAC
GTCGAGAACG GCGTCGTCCG GATCATCGTG AGCGTCGACC AGACCACCTG CTCGAACTGC
TTCCGCCCCT ACGTCTTCAC CGCCCAGAAC GCCGCGCTGA CCTCGTGGAG CGCCCCCGTG
CAGATGTCCG GGCTCGGGGC GAACCACATC GACACCTACG TGGTGAAGTC CGGGAGCGCC
TACCACGCGT TCACCAAGAA CGAGACCACC AAGTACATCG AGCACTGGGT CGGCACGAGC
CTGACCGGCG GGTGGACCCT GCGCGGTCAG CTGTGGACCT CGGGCCACGA GGGGCCCGCC
GTGCTGCGGA TGGCCGACGG GACCTGGCGG ATCTGGGTCG ACAAGTACAC CAACGGCGGC
ATGTGGACCG CCACCAGCGC CGACCTCGAC TCCTGGTCCG GGCTCGGCCA GGTCGCCTGC
GCCGGGTGCC GCCACGGCAC GGTCCTGGCC GTGGCCGACC TGCCCTCCCC AGCGGCGGCC
TACCGCGTGG ACAACCGCAA CAGCGGCCGT TCCCTGGACG TCGTGTCCGC CTCCACCGCC
GACAACGCCG AGGTCAAGCA GTGGGCCTGG AACGGCGGCG ACAACCAGAG GTGGGAGTTC
CGGGACACCG GCGACGGGTA CTCCCGGATC GTCAACCGCA ACAGCGGCAA GTGCCTGGAC
GTGGCCGGCG CCTCCACCGC CGACGGGGCC AACGTCATCC AGTACGCCTG CGGGTCCGGC
GCGAACCAGC AGTGGCAGTG GCAGGCGAGC GGCAGCCACT TCCGGATCGT CGCGCGGCAC
AGCGGCAAGT GCCTCGACGT CGTCGGCTCC GGGCTCCAGG ACGGCGCCGA CGTCCAGCAG
CTCACCTGCG GCAGCGGCGC GAACCAGCAG TGGGGCCGCG CCCAGACCTG A
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| Protein sequence | MHRPPTFARR LARLCLALLT AAATAVAVAP PAQAAAGYLY TTFKGDGAAD QELWVYSSTN
GTSFSAFADT NYRGPSGVLR DPSVIRHNGL YYVAHTVQSW TTNSTYFNIA SSPDLLTWTH
VASVNSGIAN TRFTWAPEFY VENGVVRIIV SVDQTTCSNC FRPYVFTAQN AALTSWSAPV
QMSGLGANHI DTYVVKSGSA YHAFTKNETT KYIEHWVGTS LTGGWTLRGQ LWTSGHEGPA
VLRMADGTWR IWVDKYTNGG MWTATSADLD SWSGLGQVAC AGCRHGTVLA VADLPSPAAA
YRVDNRNSGR SLDVVSASTA DNAEVKQWAW NGGDNQRWEF RDTGDGYSRI VNRNSGKCLD
VAGASTADGA NVIQYACGSG ANQQWQWQAS GSHFRIVARH SGKCLDVVGS GLQDGADVQQ
LTCGSGANQQ WGRAQT
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