Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3912 |
Symbol | |
ID | 8328105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 4591490 |
End bp | 4592509 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644944392 |
Product | periplasmic binding protein |
Protein accession | YP_003101629 |
Protein GI | 256377969 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000229928 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGACTT TTTGGCTTCG TGTCGTGTTT TCCGGGGCGG TCGTTTGTTC AGCGCTTTCC GGGTGTGGTG GGCGGGGCGG GAGCGCTGAG GGGCGCGTCG GCGTGGTCAA CTGCGGTGAG GAGGTCTCCT ACCCGAGTCC GGCCCAGCGG TTGTTCGTCA ACCAGGGCAA CCGGATCGCC ACCGTGCTCG CCCTCGGCGC GGCGGACCGG GTGGCCGCGG TGAGCAGCGT CGGTGACGAT CGGGACGTGC TCGCCGCGGC TTACGGGGCC GAGGTGGTGG ACGGGCTCGT GGTCGCGACC GAGGGGCAGC CTTCGTTGGA GAACGTGGTC GCGCGGCGGG CCGACGTGGT GGTGTCGTGG TTCGGCGACG GGGACGCCGT GTCGCCGGAG CGGTTGGCGG AGCGGTCGAT CGCCGCCTAC CAGTCCACCG AGGGGTGTCG GAAGGGGACG GGGGCAGAGC GCGGCACGGT GGAGCCCTGG GAGGCGTTGC GGACCGACCT GCGCGGGTTG GGGCGGATCA CCGGGCGGGA GGGGCGGGCC GAGGAGGTGG TGCGCGGGAT CGAGGAGCGG TTGGGCGCGT TGGCAGCCGC TCCCGCGGCT GCGGAGCGGC CCTCGGTGTT CCTGTTCGAC CGGGGGACTT CGGACGTCTA CTCCAGCGGG GCTTACGGCG CGCCTCAGGC GATCATCGAG GCGGCGGGGG CGCGGAACGC GTTGGGGGAC CTGGAGGAGT CCTGGACTTC GGTGTCGTGG GAGCGGGTCG TCGCGGCGCG GCCGGACTTC ATCGCGTTCG TCGACTACGG CAGGCAGAGC TTCGAGGACA AGGTGGCGGT GCTGCGGACC AACCCGGCCA CCAGGGACCT GCCCGCCGTC GTGGAGGGGC GGTTCCTGAA CCTGCCGTTC GCGATGTGGA CGAGCAGCCC GTTGAACGTG GACGCCGCCG AGCACCTGCG GGGCGCGCTG GAGGCGGGGA ACCTGGTGCC GCGCAGCGGG ATCGAGGCGC GGCTGGACGT GCCGGGCTGA
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Protein sequence | MTTFWLRVVF SGAVVCSALS GCGGRGGSAE GRVGVVNCGE EVSYPSPAQR LFVNQGNRIA TVLALGAADR VAAVSSVGDD RDVLAAAYGA EVVDGLVVAT EGQPSLENVV ARRADVVVSW FGDGDAVSPE RLAERSIAAY QSTEGCRKGT GAERGTVEPW EALRTDLRGL GRITGREGRA EEVVRGIEER LGALAAAPAA AERPSVFLFD RGTSDVYSSG AYGAPQAIIE AAGARNALGD LEESWTSVSW ERVVAARPDF IAFVDYGRQS FEDKVAVLRT NPATRDLPAV VEGRFLNLPF AMWTSSPLNV DAAEHLRGAL EAGNLVPRSG IEARLDVPG
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