| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3864 |
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| Symbol | |
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| ID | 8328056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 4529109 |
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| End bp | 4530809 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644944351 |
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| Product | protein of unknown function DUF181 |
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| Protein accession | YP_003101589 |
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| Protein GI | 256377929 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1944] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00702] uncharacterized domain
[TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000134117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGACG TCGAGGTCGT GGAGCTGACC GGGTACGCGC TGGGCGAGCT GGAGCGGCTC
GGGGTGGACG GGCCGGTGCT GCCGGTGCGG TTCGACGGCG CGCTGGTGCT CGTGGGGCCG
GTGCTGGACG GGAGCGGGGT GTGCCTGCGG TGCGCCGAGG ACGCCCGGCT CGCGGCGCTG
GGGGCGGTGG TGCCGCGTGC GGACCCGGCG ATGCGGGTGG GTGGTCTGGT CGTCCCCGCG
CTGCGGCCGG TGCTCGACGC GCTGGTGGAG CGCGTGCTGG CCGATCCCGG CGCCCATCGT
GATCGGGTGC TGGCCCTGCG GTCGGACCTG GGCGCGGTTG GCGAGCACCG GGTCCGGCCG
AGGCCCGAGG GGTGTGCGAG GTGCGGGCCG CTGCCCGAGG ACTCGGCGGA GGCCGCGAGC
GTGGTGCGCG CGCCCGTGCC GGTGGAGCCG GGGTCGTTGC GCGGTGAGAA CGCTGCGACC
GCAGGGGATT CGGTGCGCCG CGAGCTGTTC GACCTGCGGC ACGGGCCGGT GGGTGGGCTG
CACCGGATCG GGGACCTGGT CGTGGCGGCG GTGAGCGCCG AGCTGGTGGG CGGGCAGGCC
GGGTTCGGGC GCACGGGCGA TTACGAGCAC GCCGAGCGGG TGGCGCTGTT CGAGGCGGTG
GAGCGGCACG CCGGTCTGCG GCCGAGGCGG GTCACCACGG TGGTGGAGGC CTCGTTCGCC
GAGCTGGGGC CCGACCGGGC GCTCGACCCG GTGCGGTTGG GGTTGCCCGA CCTGGAGTCG
CCGCACGTGA CGCCGTACCG GCCGGACGTG CGGATCCGCT GGGTGCACGG GTGGTCCTAC
ACGCGGGGGC GGGCCGTGGC GGTGCCCGAG CACGTCGCCT ACTGGGGGCG GGCGATCGGG
CCGAGGTTCG TGGACGAGAC GTCCAACGGG TGCGGCACGG GCAACAGCCT CACGGAGGCG
GTGCTGCACG GGCTGTTCGA GGTCGCCGAG CGGGACGCGT TCCTGACCGC CTGGTACGGG
CGGGTGCCGT TGCCGTCGCT GCGCTCGGAC GACGGGCTGA CCGCGCACGT GGCGGACCGG
TTGGAGCAGG TGGGGTATCG GCTGGAGCTG TACGACGCGA CGAACGACCT CGGGGTGCCG
TCGGTGCTGT CGTTGGCCCG GCGGGTGGAG GGGCGGGGTG GGTTCCCGTG CGCGTTCTAC
GCGGCGGGGG CGGGGTTGGA CGTGGAGGCG GCGGTGCGGG CCGCGGCGGC CGAGGTGGTG
ATGGACGTGG AGGCGGGGGC CAAGCGGTAC CGGAGCGAGC CTGGGGACTA CGAGCTGGAG
CGGTTGCGGC GGATGCTCCG CGAGCCCCGG CTGGTGCGGA CGATGGACGA CCACGTGAAC
GTCAACGCGT TGCCGGAAGC GTTGGGGCGG CACGACTTCC TGGTTCCGGG GCCGGGGCGG
GAGCTGGTGG CGCCGGACGT GCCGAGCGGT GATCTCGACG CGCTGCTGGA GCACTACGTG
CGGCGGTGGG AGGCGTTGGG GCTGGAGGTG ATCGCGGTGG ACCAGAGCGA TCCGGTGGTG
CGGGAGCGGT TGGGGTTGTG CTCGGCGAAG GTGATCGTGC CGGGGGCGGT GCCGATGACG
TTCGGGGAGG TGAACCGGCG CACGGGTGGC ATACCCCGGC TGCGCCTGTC CGGTCCCCCG
CTGCCGCACC CGTTCCCGTG A
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| Protein sequence | MSDVEVVELT GYALGELERL GVDGPVLPVR FDGALVLVGP VLDGSGVCLR CAEDARLAAL
GAVVPRADPA MRVGGLVVPA LRPVLDALVE RVLADPGAHR DRVLALRSDL GAVGEHRVRP
RPEGCARCGP LPEDSAEAAS VVRAPVPVEP GSLRGENAAT AGDSVRRELF DLRHGPVGGL
HRIGDLVVAA VSAELVGGQA GFGRTGDYEH AERVALFEAV ERHAGLRPRR VTTVVEASFA
ELGPDRALDP VRLGLPDLES PHVTPYRPDV RIRWVHGWSY TRGRAVAVPE HVAYWGRAIG
PRFVDETSNG CGTGNSLTEA VLHGLFEVAE RDAFLTAWYG RVPLPSLRSD DGLTAHVADR
LEQVGYRLEL YDATNDLGVP SVLSLARRVE GRGGFPCAFY AAGAGLDVEA AVRAAAAEVV
MDVEAGAKRY RSEPGDYELE RLRRMLREPR LVRTMDDHVN VNALPEALGR HDFLVPGPGR
ELVAPDVPSG DLDALLEHYV RRWEALGLEV IAVDQSDPVV RERLGLCSAK VIVPGAVPMT
FGEVNRRTGG IPRLRLSGPP LPHPFP
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