| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3811 |
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| Symbol | |
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| ID | 8328003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 4471084 |
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| End bp | 4472016 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644944298 |
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| Product | Squalene/phytoene synthase |
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| Protein accession | YP_003101536 |
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| Protein GI | 256377876 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGTCG ACCGAGAACT CGACGCCGCC GACGTGCGAG ACCCGCTGCT GCGCGACGCC
TACCGGCGCT GCCGGGAGCT GAACGCCGAG CACGGGCGCA CCTACTACCT GGCGACCCGG
CTGCTCCAGC GCGAGCAGCG GCCCGCCGTG CACGCCCTCT ACGGCTTCGC CCGCTGGGCC
GACGACGTGG TGGACGAGGT GCACGACGGC CGCACCGCGC GCGAGCGGGC GGCAGGACTG
TCCGAAGTGG ACCGGGCGCT GACGGCGGGG CTGGACGCGG GGCGCAGCGA GCACCCGGTG
GTGGCGGCCG TGGTGGACAC CGCCCGCCGC TACGACATCG ACCGCGCCCA CTTCACCGAC
TTCCTGCGCT CGATGCGGAT GGACCTGACC GTCGCCGACT ACGCGACCTA CGACGACCTC
GCCGAGTACG TGCACGGCTC GGCCGCCGTG ATCGGCCTGC AGGTGCTGCC GGTGCTGGGC
ACGGTCGTGC CGCGCGCCGA GGCGGAACCG GCGGCGGCGG CGCTGGGCGT GGCGTTCCAG
CTGACCAACT TCCTGCGCGA CGTCGGCGAG GACCTGGACC GGGGGCGGGT GTACCTGCCG
CTGGACGAGC TGGCCGCGTT CGGCGTGGAC CGGGAGCTGC TGGAGTGGGC GCGGCGGCGC
GACCGCACCG ACCCGAGGGT GCGCAAGGCG CTGGCGCACC AGGTCGCGCG GGCCCGGTCG
GTGTACCGGC GGGCGGAGCC GGGGATCGCG ATGCTGGCGC CGCGCTCGCG GCCGTGCGTG
GCGACCGCGT ACCGGCTGTA CGGGCGCATC CTGGACCTGA TCGAGGACGC GGACTACGAC
GTGCTGTCCC GGCGGGTCGT GGTGTCCACC GGGCGGCGGC TGGCGATCGC GCTGCCCGCG
CTGGCCAAGG CGGCGATGGC GCGGTCGGCC TGA
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| Protein sequence | MSVDRELDAA DVRDPLLRDA YRRCRELNAE HGRTYYLATR LLQREQRPAV HALYGFARWA
DDVVDEVHDG RTARERAAGL SEVDRALTAG LDAGRSEHPV VAAVVDTARR YDIDRAHFTD
FLRSMRMDLT VADYATYDDL AEYVHGSAAV IGLQVLPVLG TVVPRAEAEP AAAALGVAFQ
LTNFLRDVGE DLDRGRVYLP LDELAAFGVD RELLEWARRR DRTDPRVRKA LAHQVARARS
VYRRAEPGIA MLAPRSRPCV ATAYRLYGRI LDLIEDADYD VLSRRVVVST GRRLAIALPA
LAKAAMARSA
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