| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3715 |
|---|
| Symbol | |
|---|
| ID | 8327905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 4364612 |
|---|
| End bp | 4365190 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644944204 |
|---|
| Product | FxsA cytoplasmic membrane protein |
|---|
| Protein accession | YP_003101444 |
|---|
| Protein GI | 256377784 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3030] Protein affecting phage T7 exclusion by the F plasmid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.238341 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTCGTGC GTTGTGGGGG TATGCGCGTG TTCGCCTTGC TGTTGGTCGC CGTGGGAGTC
GAGATCGCCA CCCTGGTGGC GGTGACGGTC AACCTCGGGT TCCTGCCCAC GCTCGGCCTG
CTGATCCTCG GCGGGGTCGC GGGCTCGTTC CTGCTGCGGC GGGAGGGGGC GCGCAGCATG
GCCGCGTTCA ACGAGGCCCT GCGCAACCGG CGCGAGCCGC ACGAGGAGGT CGCGGACGGG
GTGCTGCTGG TCGCGGCCGG GCTGCTGATC GTGCTGCCGG GCTTCATCAG CGACGTCGCC
GGCCTGCTGC TGCTCCTGCC GCCGGTGCGG CGCGCGGTGG GCGCGCGGAT CGCCCGCCGC
TCGCGCGAGC GCGCCGCGAA CGCCGTGCTC AACCAGCGCT TCGGCAGGCC GCCCGGCGCG
GGGAACGTCG TGGTCGACGG CGTGATCATC GATCTGGGCG GGCAGCGGGG CGCGCCCCGG
CCGCGCTCGG GGGGCGCGCC GCTGGGCGGC AACGCGATCG AGGGCGTGGT GCTCGACTCG
CGGGTGGTCG ACGGGGACTC GGGCCCCACC ACCCGCTGA
|
|---|
| Protein sequence | MFVRCGGMRV FALLLVAVGV EIATLVAVTV NLGFLPTLGL LILGGVAGSF LLRREGARSM
AAFNEALRNR REPHEEVADG VLLVAAGLLI VLPGFISDVA GLLLLLPPVR RAVGARIARR
SRERAANAVL NQRFGRPPGA GNVVVDGVII DLGGQRGAPR PRSGGAPLGG NAIEGVVLDS
RVVDGDSGPT TR
|
|---|
| |