| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3613 |
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| Symbol | |
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| ID | 8327803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4228544 |
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| End bp | 4230241 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644944108 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_003101348 |
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| Protein GI | 256377688 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACG CGGCCCCCGC GCACGACCAC GACGTGCTGG TCGTCGGGTC CGGTTTCGCC
GGCGCGGTGA CCGCGCTGCG GCTCACCGAG AAGGGCTACC GGGTCTGCGT CCTGGAGGCG
GGCTACCGCT TCGCCGACGC CGACTTCCCG AAGACCTCGT GGCGCCTGCG CAAGTACCTG
TTCGCGCCCA GGCTGGGGCT GCGCGGGTTC CAGCGCCTGC ACCGGCTCGG CCCGCTCGTC
GTGCCCGCGG GCGCGGGGGT CGGCGGCGGG TCGCTGGTGT TCGCCAACAC CCTGTACGAG
CCGGGGCAGG GCTTCTACGA CGACCCGGCG TGGTCCGGCG TCACCGACTG GAAGTCCGAG
CTGGCCCCGC ACTTCGACCA GGCCCGGCGG ATGCTCGGCT CCGCGGTCAA CCCGACCACC
ACGCCCACCG ACCGCGTGAT GCGGTCGGTG GCCGAGGACA TGGGCGCGGG CGGCACGTTC
CGCCCGCTGC CCGTGGCCGT CCACTTCGGA CCGCCGCAGG AGGTCGACGA CCCGTACTTC
GGCGGCGCGG GCCCCCGGCG CTCCGGGTGC CGCGAGTGCG GCGAGTGCCT GACCGGCTGC
CGGTACGGCG CGAAGAACAC CGTGGTGAAG AACTACCTGC ACCTGGCGGA GAACGCGGGC
GCGCAGGTGC GCGCCGAGAG CACCGTGACG TCCGTGCGCC CGCTCGACGG CGGCGGCTAC
GCGGTGCAGG TCGTGCGCAC CGGGGCGTGG TTCGCCCGCC CGACCACGCT CACCGCCGAG
CACGTGGTGC TCGCGGCAGG CGCGCTGGGC ACGCAGCGGC TGCTGCACCG CATGGTCGGC
GACGGCTCGC TGCCGCGCAC CTCGTCCCGG CTGGGCAGCC TCACCAGGGC GCCGTCCGAC
CTGCTGGCCG CGACCGCGCC CGAGGTCGGG GCCGACGACT ACAGCACCGG CGTGGCCGCG
ACCTCGGCGT TCCGCCCCGA CCCGGACACC CTCGTCCAGG CGGGCCGCTA CGGCAAGGGC
TCCAACTCCA TGGGCCTGGC CACCACCCCG TTCGTCGACG CCGTCGGCAG GGGACCGCGC
TGGCTGCGCT GGCTCGGCGC GGTAGCTCGC GACCCCGTCG CGGCGGCCCG GTTCCTGGAC
GTGCGCCGCT GGTCCGAGCG CACGATCATC GTGTTCGTCG TGCGCACCGG CGCGGGCACG
TTCACCGTCT CCCGCAAGCG CGGCGGCGGC CTCACCGCCC GCCGCGACCC CGGCGCGCTG
CCCACCGTCA CCTCGCCGCT GGTCGCCGAC GTGCTGCGGC GCACCGCGCA GCGCATGGGA
GGCGCGCCCG CGGGCACTGT GCCGGGCCTG GGGCACGTGC CCGTGGTCCT GCCGTTCGTC
GGCGGCTGCC CCATCGGCGA GACCGCCGAG ACCGGCGTCG TCGACCCGTA CCACCGGCTG
CACGGCCACC CCGGCCTGCA CGTCGTGGAC GGCTCGGCGG TCACCGCCGA CGCGGGCGTC
AACCCGTCGC TGACCATCAC CGCCCAGGCC GAGCGCGCCA TGTCGCTGTG GCCCAACAAG
GGCGAGCCCG ACCCCCGTCC CGAACCGGGG CAGCCCTACC GCAGGCTCGC CCCCGTGCGC
CCGCACGCCC CGGCCGTCCC CGCGCACGCC CCCGCCGCGC TGCGCACCAC CCCCGACGCC
ACGGAGGCGA CCCAGTGA
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| Protein sequence | MTDAAPAHDH DVLVVGSGFA GAVTALRLTE KGYRVCVLEA GYRFADADFP KTSWRLRKYL
FAPRLGLRGF QRLHRLGPLV VPAGAGVGGG SLVFANTLYE PGQGFYDDPA WSGVTDWKSE
LAPHFDQARR MLGSAVNPTT TPTDRVMRSV AEDMGAGGTF RPLPVAVHFG PPQEVDDPYF
GGAGPRRSGC RECGECLTGC RYGAKNTVVK NYLHLAENAG AQVRAESTVT SVRPLDGGGY
AVQVVRTGAW FARPTTLTAE HVVLAAGALG TQRLLHRMVG DGSLPRTSSR LGSLTRAPSD
LLAATAPEVG ADDYSTGVAA TSAFRPDPDT LVQAGRYGKG SNSMGLATTP FVDAVGRGPR
WLRWLGAVAR DPVAAARFLD VRRWSERTII VFVVRTGAGT FTVSRKRGGG LTARRDPGAL
PTVTSPLVAD VLRRTAQRMG GAPAGTVPGL GHVPVVLPFV GGCPIGETAE TGVVDPYHRL
HGHPGLHVVD GSAVTADAGV NPSLTITAQA ERAMSLWPNK GEPDPRPEPG QPYRRLAPVR
PHAPAVPAHA PAALRTTPDA TEATQ
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