| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3571 |
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| Symbol | |
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| ID | 8327761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 4147372 |
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| End bp | 4150236 |
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| Gene Length | 2865 bp |
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| Protein Length | 954 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644944067 |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003101307 |
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| Protein GI | 256377647 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACGAGG TGGTGGAACG GGGCGGGCGC CTGGCGTTCC GGGTGCTGGG ACCGATCGAG
GTCACCGGCT CCGGGGGGCC GGTGCGCATC CCGCCGGGAC GGCAGCAGGT CATCCTGGCC
TGCCTGCTCG TGGAGGCGAA CAAGGTGGTC AGCACGGACC ACCTGGTGGA CGCGCTGTGG
GAGGTCAACC CGCCGGACAC CGCGCGCACC CAGGTGCAGA TCTGCGTGTC GCGGCTGCGC
AAGACGCTGG CCGACGCGGG CGTGGACGTC TCCATCGTGA CCCGCCCGCC GGGCTACCAG
CTGCGCCTGC CGGACGCCTC GCTGGACGTG CACGAGTTCA CCAGGGGCGT CACCGAGGGC
CGCGCGGCGG CCAGGCGCGG CGAGCTGTCC GAGGCGTCCG AGCTGCTGCG GGCCTCGGTG
GGGCTGTGGC GCGGGGAGTG CCTGAGCGGG CTGACGAGCG CGCCGCTGCG CACCAGGGCG
CTGCGCCTGG AGGAGGACCG GCTCAACGCG GTGGAGACCT GCCTGGGCAT CGACCTGGAG
CTGGGCCTGC ACCACGAGCT GGTCGGCGAG ATCGGCAGGC TGGTGCGCGA GCACCCGCTG
CGGGAGCGGC CGAGGGCGCT GCTGATGCTG GCGCTGTACC GGTCGGGCCG CAAGGCCGAG
GCCCTGGAGG TGTACCGGGA GGGCCGCGAC CTGCTGGTGG AGGAGCTGGG TCTGGAGCCC
GGCGAGGAGC TGCGGGAGCT GGAGCGGGCG ATCCACGCCG GGGACGCCTC GCTGCTGCGC
GGCCCCGAGC CCGCGCGCGA GCGAAGACCC GCTGAGCCCG CCGACGTCGC GCGCGCGGCG
GTGCCCAGGC AGCTGCCCGC CGACACCGCC GACTTCATCG GCGGCGAGGA GCTGATCACC
GCCGCCGAGG AGGTGCTCAC CGGGGGCGCG GGGCGGCGCG CGGTCGGCGT CGTGGTGGTC
ATCGGCAGGC CGGGCGTGGG CAAGTCGACG CTGGCCGCGC ACCTGGGGCA CCGGGTCGCC
GAGGAGCACT TCCCCGACGG GCAGCTGTAC TGCGACCTGC GCGGCGGCTA CGGCGACGCC
GGCGGGTCCG CCGACGTGCT CGGCCGGTTC CTGCAGGCGC TCGGCATCCC CGGCGCGATG
ATCCCGGTGG AGCACACCGC GCGCACCGAG ATGTACCGGA CGCTGCTGGC GGACCGGCGG
GTGCTGGTGG TGCTGGACAA CGCGGTCAGC GAGCGCCAGG TGCTGCCGCT GCTGCCCGGC
GGCGGGCGCT GCGCGGTGGT GGTGACCAGC CGGGCGCGGC TGACCGGGCT GCCGGGCGCG
CGGCAGCTGG AGCTGGACGT GCTGGACCGG GAGCAGTCGC TGGAGCTGCT CGGCCGGGTC
GTGGGCGAGC GGCGGGTGGC GGGCGAGCCG GAGGCCGCGG AGGCGCTGGT GCGCACCGTC
GGCGGGCTGC CGCTGGCGCT GCGGATCGTC GCGGCGCGGC TGGCGGCCCG GCCGCACTGG
TCGCTGGCGT CGATGGTGCA CCGGCTGGCC AGCGAGCGGC ACCGCCTCGA CGAGCTGGCG
CACGGCGAGA TGACGATCCG GGCGAGCCTG TCGCTGACCC ACGACGGGCT GGACCAGCCG
ACGCGGCGGC TGTTCGGGCT GCTCAGCCTG GCCGAGGGCC CGTCGCTGCC CGGCTGGGTG
GCGGGCGCGG CGCTGGACGA CGGCAGGCCG TACGCGTCGG ACCTGATCGA GCCGCTGGTG
GACGTGCAGA TGCTCGACGT GGTCTCGGTC GACGGCACCG GCGAGTTCCG CTACCGCTTC
CACGACATCA TCCGGCTGTT CGCCCGCGAG CAGCTGGCGT CGGTGGACGA GCGGGAGCAG
CGGGAGGTGC AGGAACGGGT GCTGGGCGGC TGGCTGTCGC TGGCCGAGCA GGCGCACCGG
GGCGTGTTCG GCGGCGACTT CACCGCCCTG CACGGGAGCG CGCCGCGCTG GCACCCGCAC
CCCGTGCACG CCGAGCGGCT GCTGGAGAGC CCACTGGAGT GGCTGGAGGG CGAGCTGCCG
AACCTGCGGG CGGCCGTGGC GCAGGCGGCG CGGCTCGGGC TGGACGAGCT GTGCTGGGAC
CTGGCGGTGA CCACGACGAC GCTGTTCGAG GCGCGCGGCC ACCTGGACGA CTGGCGGCAC
ACCCACGACG AGGCGCTGCG GGCCACCAGG GCCGCGGGCA ACGCGCGCGG CACGGCGGCG
CTGCTGGCCT CGCTCGGCAC CCTGCACATC AACCGGGGGC GCGCCGAGGA GTCCGGGGCG
GTCCTGGTGG AGGCGCTGGC GGCGTTCACC GAGCTGGGCG ACGTGCGCGG GCAGGCGCTG
TGCAGGCGCG ACCTGGGGCT GCTCACCCGG CAGGCCGGGG ACGACGCGGG CGCGCTGGCG
CTGTACGGGC TGGCGCTGGC CGGGTTCGAG GAGGTCGGCG ACGTCGTCGG GCGGGCGATC
GTGCTGACCC AGCGGGCGCA CGTGCTCATG CGCACCGGGC GGGACGACGA GGCGCTCGCG
CAGCTCGCGG AGGCGATGGC CACCTGCCGG GAGGTCGGGT ACACCGGCGG GGTGGCGACC
ACGATGCGGC GCATCGGGCA GGTGCAGCTG CACCGGGGTG AGCACGAGCT CGCGGAGCGG
ACGCTGACCG AGGTGCTGGA GATGGTGCGG GCCAGCCGGG ACGTGATCGG CGAGGGGCAC
CTGCTGCACA ACCTGGGCGA GGTGAACGCG GCGGCGGGGC GCGTCGAGGC GGCTCGGGAG
TGCTTCGAGC GGTCGCTGGC GGTGCGGGAG CGGATGATGG ACCACGGCGG GGTGGCGGTG
GTGCGGCGGG AGCTGGCGCT GCTGGAGGGG AAGGTCCCCG CGTAG
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| Protein sequence | MDEVVERGGR LAFRVLGPIE VTGSGGPVRI PPGRQQVILA CLLVEANKVV STDHLVDALW
EVNPPDTART QVQICVSRLR KTLADAGVDV SIVTRPPGYQ LRLPDASLDV HEFTRGVTEG
RAAARRGELS EASELLRASV GLWRGECLSG LTSAPLRTRA LRLEEDRLNA VETCLGIDLE
LGLHHELVGE IGRLVREHPL RERPRALLML ALYRSGRKAE ALEVYREGRD LLVEELGLEP
GEELRELERA IHAGDASLLR GPEPARERRP AEPADVARAA VPRQLPADTA DFIGGEELIT
AAEEVLTGGA GRRAVGVVVV IGRPGVGKST LAAHLGHRVA EEHFPDGQLY CDLRGGYGDA
GGSADVLGRF LQALGIPGAM IPVEHTARTE MYRTLLADRR VLVVLDNAVS ERQVLPLLPG
GGRCAVVVTS RARLTGLPGA RQLELDVLDR EQSLELLGRV VGERRVAGEP EAAEALVRTV
GGLPLALRIV AARLAARPHW SLASMVHRLA SERHRLDELA HGEMTIRASL SLTHDGLDQP
TRRLFGLLSL AEGPSLPGWV AGAALDDGRP YASDLIEPLV DVQMLDVVSV DGTGEFRYRF
HDIIRLFARE QLASVDEREQ REVQERVLGG WLSLAEQAHR GVFGGDFTAL HGSAPRWHPH
PVHAERLLES PLEWLEGELP NLRAAVAQAA RLGLDELCWD LAVTTTTLFE ARGHLDDWRH
THDEALRATR AAGNARGTAA LLASLGTLHI NRGRAEESGA VLVEALAAFT ELGDVRGQAL
CRRDLGLLTR QAGDDAGALA LYGLALAGFE EVGDVVGRAI VLTQRAHVLM RTGRDDEALA
QLAEAMATCR EVGYTGGVAT TMRRIGQVQL HRGEHELAER TLTEVLEMVR ASRDVIGEGH
LLHNLGEVNA AAGRVEAARE CFERSLAVRE RMMDHGGVAV VRRELALLEG KVPA
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