| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3536 |
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| Symbol | |
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| ID | 8327726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 4109560 |
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| End bp | 4110729 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644944034 |
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| Product | cellulose-binding family II |
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| Protein accession | YP_003101274 |
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| Protein GI | 256377614 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0870492 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCACCC CGTTCCGGCT CGCGGCGCTC GCCGCGGCCC TGGTCGCGGT CACCGGGTTG
GTCGTGCTCG GCGGCGGTGG AGGCGGCGGC ACCGCCGTCG CCGCGCCCGC CTGCGCCGTC
GACTACACGC CCAACCAGTG GGCCACCGGC TTCACCACCG AGGTCGCGGT CACCAACCGC
GCCGCGCCCG TCACCACCTG GACGCTGACC TGGACCTGGG CGGGCAACCA GACCGTCACC
TCGGCCTGGA ACGCCCAGGT CACCCAGACC GGCGCCAAGG TCACCGCCCG CGACGTCGGC
TGGAACGGCC AGCTCGGCAC CGGCGCGACC GCCCGCTTCG GGTTCCAGGG CGCCTACTCC
GGGACCAGCG CCGCCCCCAC CGACTTCGCC CTCAACGGCA CCCCCTGCAA CGGCGACACC
CCGCCCACCA GCACCACCAC CCCGCCGACC ACCACGCCGC CGACCACGAC CACCACCCCG
CAGCAGCCCA CCGGCTGCGG CACCGCGACC CTGTGCGACG ACTTCGAGTC CCAGACCGGG
ACCACCCCCT CCGGCAAGTG GAGCGTCGGC GCGGCCAACT GCACCGGCAC CGGCACGGTC
ACCGTCGACA GCTCCGTCGC GCGCAGCGGC TCCAAGTCGG TCCGGGTCAA CGGCGGCGTC
GGCTACTGCA ACCACATCTT CTTCGGCGCC AGCGTGAGCG GACCGGTCGT GCACGGCCGG
TTCCACGTCC GGCACACCAC CGCGCTGCCC GCCGCGCACG TGACGTTCAT GGCGCTCAAG
GACTCCGCCG ACGGCGGCAA GGACCTGCGC ATGGGCGGCC AGAACGGCGC GCTGCAGTGG
AACCGCGAGT CCGACGACGC CACCCTGCCC GCGCAGAGCC CCCAGGGCGT CGCGCAGAGC
ATCCCGCTGC CCACCGGCCG CTGGACCTGC GTGCAGTTCA CCCTCGACGG CACGAGCGGC
AGGCTCAGCA CCAGCGTCGA CGGGGTCGCC GTCCCCGGCC TGCAGGTCGA CGGCGCCCCC
ACGCCCGACA TCGACCAGCA GTGGCTCGCC CGCGCCAACT GGCGGCCCAA CACGGTGGAC
GTGCGGCTGG GCTGGGAGAG CTACGGCGAC GGCGGCGACA CCCTTTGGTA TGACGATGTC
GCCTTCGGGA GTGCACCTCT GGCCTGCTAG
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| Protein sequence | MRTPFRLAAL AAALVAVTGL VVLGGGGGGG TAVAAPACAV DYTPNQWATG FTTEVAVTNR
AAPVTTWTLT WTWAGNQTVT SAWNAQVTQT GAKVTARDVG WNGQLGTGAT ARFGFQGAYS
GTSAAPTDFA LNGTPCNGDT PPTSTTTPPT TTPPTTTTTP QQPTGCGTAT LCDDFESQTG
TTPSGKWSVG AANCTGTGTV TVDSSVARSG SKSVRVNGGV GYCNHIFFGA SVSGPVVHGR
FHVRHTTALP AAHVTFMALK DSADGGKDLR MGGQNGALQW NRESDDATLP AQSPQGVAQS
IPLPTGRWTC VQFTLDGTSG RLSTSVDGVA VPGLQVDGAP TPDIDQQWLA RANWRPNTVD
VRLGWESYGD GGDTLWYDDV AFGSAPLAC
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