| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3528 |
|---|
| Symbol | |
|---|
| ID | 8327718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 4097670 |
|---|
| End bp | 4098797 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644944026 |
|---|
| Product | protein of unknown function DUF450 |
|---|
| Protein accession | YP_003101266 |
|---|
| Protein GI | 256377606 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4748] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0402721 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCG CGGAGCGGGC GCAGGCGCTG GCCATGAAGA TCCGCAAGTT CAAGGCCGGG
ATCGAGACCG AGGAGGCGAC CAAGAACGCC TTCGTGATGC CGTTCATCAG CACGGTCCTC
GGCTACGACG TGTTCAACCC GGCGGAGGTC ATCCCCGAGT TCACCGCCGA CGTGGGCGTC
AAGAAGGGCG AGAAGATCGA CTACGCCATC GTGCACGACG GGCAGGTGCA GGTCCTGCTG
GAGGCGAAGA AGGTCAACGA CCCGCTCAGG CTGGAGCACG CCTCGCAGCT GTTCCGCTAC
TTCGCGGCGA CCAACGCGCG GATCGCGATC CTGACCAACG GCGAGGTCTA CCAGTTCTAC
ACCGACCTCG ACGCGCCCAA CCGCATGGAC GCCAAGCCGT TCCTGGTCAT GGACTTCTCC
GACGTGGACG AGGCGCTCCT GCCGGAGCTG GCGAAGCTGA CCAAGGAGGC GTTCGACCTC
GACTCGGTGA TCAGCGCGGC CGGTGAGCTC AAGTACATCG GGCAGCTCAA GCGGGTGCTC
GCCGCGCAGT TCAAGGAGCC CGAGGACGAC TGGGTGAAGT TCCTGGCCAC CCGCGTCTAC
GAGGGCTCGT TCACCCAGCG GGTGCGCGAG CAGTTCGCGC CGCTGGTGGA CAAGGCGTGC
CGCCAGTTCC TCAACGACCA GGTCAACGAC CGGCTCAAGA ACGCGCTCGG CGGCGGGTCG
TACGTGCGCG GGGTGGGGGC GCCGCAGGTC GAGGAGAGCG AGCCCGCGCC CGTCGAGACC
CCGCCGGCCG GGGTGGAGGA GCGGGGCGGT GACGTCGTCA CCACCGAGGA GGAGGTCGAG
GGGTTCCGGA TCGTGCGGGC CATCGTCTGC GGCTCGGTGC CCGCCACCAG GGTCTACGCC
CGCGACACCA AGACCTACTT CGGCGTGCTG CTCGACGACA ACAACCGCAG GCCGATCGCC
CGGCTGTGGT TCAACCGGTC CAAGAAGTAC CTCGGGGTGT TCGACGAGCA GAAGGTCGAG
ACGCGCGTGG CCATCGAGCG GGTGGAGGAC ATCTACCTGC ACGCCGAGCA GCTGCGGCTG
ACCGTGAACC GGTACCTGGG CGCCCCGGCC GAACCCCCGG CCGCCTGA
|
|---|
| Protein sequence | MDIAERAQAL AMKIRKFKAG IETEEATKNA FVMPFISTVL GYDVFNPAEV IPEFTADVGV
KKGEKIDYAI VHDGQVQVLL EAKKVNDPLR LEHASQLFRY FAATNARIAI LTNGEVYQFY
TDLDAPNRMD AKPFLVMDFS DVDEALLPEL AKLTKEAFDL DSVISAAGEL KYIGQLKRVL
AAQFKEPEDD WVKFLATRVY EGSFTQRVRE QFAPLVDKAC RQFLNDQVND RLKNALGGGS
YVRGVGAPQV EESEPAPVET PPAGVEERGG DVVTTEEEVE GFRIVRAIVC GSVPATRVYA
RDTKTYFGVL LDDNNRRPIA RLWFNRSKKY LGVFDEQKVE TRVAIERVED IYLHAEQLRL
TVNRYLGAPA EPPAA
|
|---|
| |