Gene Amir_3479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3479 
Symbol 
ID8327669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4045880 
End bp4047280 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content78% 
IMG OID644943979 
Producthypothetical protein 
Protein accessionYP_003101219 
Protein GI256377559 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGCA CGACGACCGG GACCCTGCTG GCCGAGCTGA GGGGCCTGTC CGCCGCCGTG 
CGCGGGCGGG AGTGGTCCGA GGGCGGGCGC GCGGAGGGCG ACCTCGGGCT GCTCGGCGCG
GCGGTCGACC CGCTGGCCGG GCTGGCGGAC GCGGGCGTCG GCGTCCTCAC CCCGCACGTG
TCGTTCCTGT CCACGCCGCT GGAGCAGCTC CGGGGCGACG GGGGCGCGGT CACCTCGTCC
GCCCGGGGCG TGCGGGAGGT GGCGGCGGAC GTGGGGGCGC TCGCCGACGC GTTCCGGCAG
GCGGCTGCCG CGACCGACGG GTGGAGCGGT GAGGCCGGTG ACGCGCACCG GATCACCGGC
GCGCAGGTCG CGGACGGCGT CAGCGCGCTC GCCGAGGCCG CCGCCACGAT CTCCGGAGCG
GTCAGCGGCG CCGGTGAGGA GGTGGTCGGG GCGCTGAGCG GCGTCGTCGG GAAGATCGTG
GACGCCGTGC GCGAGATGGT GCCGGTGATG GCGGGCGGCA TCGCCCGCGC CCCGCTGACG
ATGGGCCTGA GCATCGGGGA GGCGATCGCG ACGTGCGTGG GCATCGCGGC CCGGTGCGGG
GAGGCGATCG CCGAGATCAT GGCGGACCTG CTGGCCTGCG GGGTGAACCT GATGAAGCTG
GTCACGGCGG TGCTGACCGT CGTGCAGGCC GTGGTCGACC TGCTGCGGGA CCTGGCGGAG
CAGGCCGGGA CACCACCGGA GACGACCAGG GGCACGGCGT CGAAGGACCT GGGGCGGGTG
GAGAAGAGCA CGACCGAGGC CGCCACGACT CCCGGACCCG GCACGCCGGA GGACGTGACC
AGCACCGAGG ACCCGAGCAC CGGCGACGAC CTGGCCACGA CCGAGGACCC TGGCAGCACG
TCCCTGGCCG GCACACCCGA CCCCGGCACT CCCGACGACC TCGGCACCAC CGAGCAGTCG
GCCGCGCTGC CGCCGGGGAC GACCACGAGC ACCGGGGTGC TGTCCCCGTC CACGCCGGAC
CTGCGCGCGG GTGGTGGCCC CGCCACGGGC GCCCCGCAGA CCGGCTCGGG TCCGTCCCCG
TCCGGCGGCG CGCTCCCGGT CGCGGGTGCG GCGGCGGGCA CCGGCGCCGC GAGCACAGGC
ACCGCGGGCG CGCGGCCGTC GGGCAGGCTC ACCACGGTCC TCGCGAACAA CCCGGAGGAA
CCCACCACCG GACCGGCGCC GACCGGCACC GGCGGCGCCG CGTCCTCCGG CTTCCCGGCC
GTCCCGGCGG CGGGCGGCGC GCGCGGCCAG GGCGGCGAGG ACACCGAGCA CGAGCGCCGC
TACCGCCTGG AAGGCGACCT CGGCCTGTTC GCCGCCGACA CCGCGGTCGT CAGCGTGCTC
GGCGCGGCCG AACAGCCGTG A
 
Protein sequence
MSGTTTGTLL AELRGLSAAV RGREWSEGGR AEGDLGLLGA AVDPLAGLAD AGVGVLTPHV 
SFLSTPLEQL RGDGGAVTSS ARGVREVAAD VGALADAFRQ AAAATDGWSG EAGDAHRITG
AQVADGVSAL AEAAATISGA VSGAGEEVVG ALSGVVGKIV DAVREMVPVM AGGIARAPLT
MGLSIGEAIA TCVGIAARCG EAIAEIMADL LACGVNLMKL VTAVLTVVQA VVDLLRDLAE
QAGTPPETTR GTASKDLGRV EKSTTEAATT PGPGTPEDVT STEDPSTGDD LATTEDPGST
SLAGTPDPGT PDDLGTTEQS AALPPGTTTS TGVLSPSTPD LRAGGGPATG APQTGSGPSP
SGGALPVAGA AAGTGAASTG TAGARPSGRL TTVLANNPEE PTTGPAPTGT GGAASSGFPA
VPAAGGARGQ GGEDTEHERR YRLEGDLGLF AADTAVVSVL GAAEQP