Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3456 |
Symbol | |
ID | 8327646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 4019738 |
End bp | 4020271 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644943959 |
Product | hypothetical protein |
Protein accession | YP_003101199 |
Protein GI | 256377539 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000430117 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCACACA CCCGAGCAGC CCTGCGAGCA CTCGCCTGCG CCCTGATCCT GCTGTCCACC GCCGCACCGG CCACCGCCGC ACCGCACCCC GCGCAACAGG AGGTGTCACC CCAGGCCCTG CGCTACCGGA TCTTCAACAC CGAGGGCGAC TGCCTGGACG GCAACAACCC CAACGCGCTC TACCTCTGGG ACTGCGTCAA CGCCACCAAC CAGTACTGGT ACTTCGACGT CCGATCCGAT GGGTGGACGC AGCTGCGCAA CGCCAAGACG CAGCGGTGCA TCCGCACCAG CAGCTTCGGG GCCTACGACG TGCCGGTGGT CACCGGGCCG TGCTCGTCGA GCGGCGAGGA CCTCTGGTAC GGCATCCACC GCGAGTCGGG CTGGTACTGG CTGGCGCCCT ACGGCTGGGA CAGCTACGAC GACCCCTGCA TCAACGGGCC GCGCTCCGGC AACGGGCAGG GCCTGTTCAT GAACCAGTGC AACGCCCAGC AGTGGCCCAC CAACTACTGG GCCTGGACCC CCATCGCCGA GTAG
|
Protein sequence | MPHTRAALRA LACALILLST AAPATAAPHP AQQEVSPQAL RYRIFNTEGD CLDGNNPNAL YLWDCVNATN QYWYFDVRSD GWTQLRNAKT QRCIRTSSFG AYDVPVVTGP CSSSGEDLWY GIHRESGWYW LAPYGWDSYD DPCINGPRSG NGQGLFMNQC NAQQWPTNYW AWTPIAE
|
| |