Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3451 |
Symbol | |
ID | 8327641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 4015301 |
End bp | 4016104 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644943954 |
Product | hypothetical protein |
Protein accession | YP_003101194 |
Protein GI | 256377534 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00447227 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCGGCGGC CCGACGACGA CGACGTCGTC GAGCTGCTCA CCCACGGCAC GCTCGACATC CGGGGCCGAC TCGTCGACGC CTCCAACGCC ACCCTGCTCT GCGACGTCGA ACTCGACGGC GCCACCGCCA CCTGCGTCTA CAAACCCGTC CGGGGCGAAC GCCCCCTCTG GGACTTCCCC GACGGCACCC TCGCCGGACG CGAGCACGCC ACCTACCTCA TCTCCCAGAC CTGCCACTTC GACCTCGTAC CCCCCACCGT CCTGCGCCCC GGCCCACTCG GGCCGGGCAT GGCCCAGCTC TGGATCGACA CCCGCGAGGA CGACGACCTC GTCGAACTCG TCCCCGCCGA CTCCCTGCGC CCCGGCCGCA TCCCCGTCCT CCACGCCACC TCCGAGGACG GCGCCCCCCT CGTCGTCGCC CACCGCGACC ACCCCGCCCT GCGCCTCATG GCCGCCTTCG ACGCCCTCGT CAACAACGCC GACCGCAAGG GCGGCCACGT CCTGCACGCC CCCGACGGCC ACGTCTACGG CGTCGACCAC GGCATCTGCC TGCACGCCGA GGACAAGCTC CGCACCGTCC TGTGGGGCTG GGAGTCCCAA CCACTCCCGG ACCAGGCCGT CGCCGGAACC GAACGCCTCC TCGCCGGACT CGACGGCGAC CTGGGGGAGA CCCTGCACGA GCACCTCACC CGAACCGAGG TCTGGGCACT GGGCTCCCGC GCCAAGCGCC TCCTCGCCAC CGGCACCCTC CCCGCCGTCG ACCACGAGCG CGACTGGCCC GCCATCCCCT GGCCGCCCTT CTGA
|
Protein sequence | MRRPDDDDVV ELLTHGTLDI RGRLVDASNA TLLCDVELDG ATATCVYKPV RGERPLWDFP DGTLAGREHA TYLISQTCHF DLVPPTVLRP GPLGPGMAQL WIDTREDDDL VELVPADSLR PGRIPVLHAT SEDGAPLVVA HRDHPALRLM AAFDALVNNA DRKGGHVLHA PDGHVYGVDH GICLHAEDKL RTVLWGWESQ PLPDQAVAGT ERLLAGLDGD LGETLHEHLT RTEVWALGSR AKRLLATGTL PAVDHERDWP AIPWPPF
|
| |