Gene Amir_3408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3408 
Symbol 
ID8327598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp3979646 
End bp3980365 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content73% 
IMG OID644943912 
Productthymidine kinase 
Protein accessionYP_003101152 
Protein GI256377492 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1435] Thymidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAACCCA CCAACCCCGC ACTCGACCCG ACCGACGCCC TGGCGTCCGT GCCCGCCGCA 
GGGGCGCGGC GCGGGGTGAG GGCTGCGGGC AGCCTGCGGT TCTTCTTCGG CCCGATGGAC 
TGCGGCAAGT CCACCCTGGC CCTGCAGATC GACCACAACC AGGCCCGCCA GGGCCGCTGC 
GGCCTGCTGC TGGTGCGCCA CGACCGCTCC GGCACCCCCA CCATCTCCAG CCGCATGGGC 
CTGGCCCGCC GGGCGCTGGA GGTCCACGAC GAGATGGACC TGGGCGCGCT GGTGCGCGAG 
CACTGGGGGC GCGGGCAGCG GGTGGACTAC CTGATCGTCG ACGAGGCCCA GTTCCTCGAC 
CCCGAGCAGG TCGACCAGCT CGCCGAGCTC GCCGACGACG CGCAGATCGA CGTCTACTGC 
TTCGGCCTGG CCACCGACTT CCGCAGCACC ATGTTCCCCG GCTCGCGCAG GCTGTTCGAG 
CTGGCCGACG AGCTCAACGC CATCCAGGTC GAGGTGCTGT GCTGGTGCGG GCTGCCCGGC 
CGGTTCAACG GGCGCGTGCA CGACGACGTG CTGGTGCGCG ACGGCAGCAC GGTCCTGGTG 
GCCGACGTGG TGCAGGTCGC CGCGGACGAC GTGCGCTACC AGGTGCTGTG CCGCAAGCAC 
TACCGCACCG GCGACCTCGG CCCGTCGGCC GTGCGCGACG GGCAGCTCAG CCTGACCTGA
 
Protein sequence
MEPTNPALDP TDALASVPAA GARRGVRAAG SLRFFFGPMD CGKSTLALQI DHNQARQGRC 
GLLLVRHDRS GTPTISSRMG LARRALEVHD EMDLGALVRE HWGRGQRVDY LIVDEAQFLD 
PEQVDQLAEL ADDAQIDVYC FGLATDFRST MFPGSRRLFE LADELNAIQV EVLCWCGLPG 
RFNGRVHDDV LVRDGSTVLV ADVVQVAADD VRYQVLCRKH YRTGDLGPSA VRDGQLSLT