Gene Amir_3333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3333 
Symbol 
ID8327523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp3909355 
End bp3910038 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content75% 
IMG OID644943844 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003101084 
Protein GI256377424 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGTTCC AACGGGCGCG GAGCGAGGAG CAGCGGGAGG TCCGCCGCCA GGCGATCCTC 
GACACCGCGG CGGCGATGCT GGCCGAGCTG CCGGTCGCCG AGATCAGCCT CAACGAGCTC 
AGCCGCCGCA TCGGCCTGGC CAAGTCCAAC GTGCTGCGCT ACTTCGAGAC CCGCGAGGCG 
GTGCTGCTGG AGCTGCTCAA CCGCTTCCTG CGGGAGTGGC TGGCCGCGAT CGCCGAGGAG 
CTGGGGGACC CCGCCCCCGA CGCCCCGGCG CAGGAGCGGG CCGCCCGGCT GGCCGAGGTG 
CTCAGCCGCT CGCTGGCCGA CCGGCCCGTG CTCTGCGACC TGTTCGGCGC GCAGGGCAGC 
GTGCTGGAGC AGAACGTCTC CGCCGAGGTC ATCGCCCGCC ACAAGCGCGC CTCGCTCGCC 
ACCCTGGCCG ACGCGACCGC GCTGGTGCGC GGGCACGTGC CGGAGCTGGG CGGGAGCGCG 
GAGGCGTACT GCCTGCAGGT GCTGGTGCTG GCGGGCGCGC TGTCGGCGTA CGTGCCGCCG 
CCCGCGAGCC TGCTGGCCGC CTACCGCGCC GACCCGACCA TCCCGGTGCT GCACGCGCAC 
GGCAGCCCGG AGACGACCAC CCTGCACGAC CTGCTCGGGG GCGCGATCGC CATGACCACG 
ACGGGCGCGC TCCCCCGGCC TTGA
 
Protein sequence
MTFQRARSEE QREVRRQAIL DTAAAMLAEL PVAEISLNEL SRRIGLAKSN VLRYFETREA 
VLLELLNRFL REWLAAIAEE LGDPAPDAPA QERAARLAEV LSRSLADRPV LCDLFGAQGS 
VLEQNVSAEV IARHKRASLA TLADATALVR GHVPELGGSA EAYCLQVLVL AGALSAYVPP 
PASLLAAYRA DPTIPVLHAH GSPETTTLHD LLGGAIAMTT TGALPRP