Gene Amir_3307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3307 
Symbol 
ID8327497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp3881859 
End bp3882383 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content74% 
IMG OID644943819 
Productisochorismatase hydrolase 
Protein accessionYP_003101059 
Protein GI256377399 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.0000000323098 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGTCC AGCCCGCCGT GGTCGCCCGC TACCCCGACC CGGCCTACCT CCCCAGGCTC 
GCCACCGCGC TCGAGGCGGC CCGCGCCGCG TCCGTGCCGG TGATCCACGT CGGCGTCGGC 
TTCCGCCCCG ACTACGCGGA GATCCACCCG CGCAACAAGA TGTTCGGCCG CCTGGCCGCG 
GCCCCCAGGG GCTCCGGCGC CACCGACTTC CACCCCGAGA CCGCGCCGCT CGACGACGAG 
GTGGTGGTGA CCAAGCGCCG CGTCAGCGCG TTCGCGGGCA GCGACCTGGA CCTCGTCCTG 
CGCGCCCAGG GCGTCGACCA CCTGGTGCTC ACCGGCATCG CGACCAGCGG CGTGGTCCTG 
TCCACCCTCC GCCAGGCCGC CGACCTGGAC TTCCAGCTCA CCGTCCTGGC CGACGGCTGC 
CTGGACGGCG ACCCCGAGGT GCACCGCGTG CTCACCGAGA AGGTCTTCCC GACGCAGGCC 
GAAGTCCGGA CGATCGCGGA CTGGGCGGGG TCCCTGGACG TGTGA
 
Protein sequence
MDVQPAVVAR YPDPAYLPRL ATALEAARAA SVPVIHVGVG FRPDYAEIHP RNKMFGRLAA 
APRGSGATDF HPETAPLDDE VVVTKRRVSA FAGSDLDLVL RAQGVDHLVL TGIATSGVVL 
STLRQAADLD FQLTVLADGC LDGDPEVHRV LTEKVFPTQA EVRTIADWAG SLDV