Gene Amir_3278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3278 
Symbol 
ID8327468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp3808681 
End bp3809337 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content71% 
IMG OID644943790 
ProductCaffeoyl-CoA O-methyltransferase 
Protein accessionYP_003101030 
Protein GI256377370 
COG category[R] General function prediction only 
COG ID[COG4122] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.507462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCAGC AGATCAGCGC CACCTCGGAA ATCCTCGACT ACGTCCGCGC GACCTCGTTG 
CGCGACGACG ACGTGCTCGC CGGTCTGCGG GAGCGGACCG CGGTTCTCCC GGCCGCGTCC 
GCGCTGCAGG TGGCCCCGGA GGAGGGGCAG TTGCTCGGCC TGCTGGTGCG CCTGGTCGGT 
GCCCGCTCGG TGCTGGAGGT CGGCACCTAC ACCGGGTACA GCACGCTGTG CATGGCCCGC 
GCCCTCCCGC CCGGCGGACG TGTCGTGACC TGCGACGTCG TCGCGAAGTG GCCGGACATG 
GGCAGGCCGT TCTGGGAGCG GGCGGGCGTC GCGGACCGCA TCGACGTCCG CGTCGGCGAC 
GCCCGCGCCA CCCTGGCCGG CCTGCACGCC GAGCACGCCG TGTTCGACCT GGTGTTCATC 
GACGCGAACA AGTCGGATTA CGTCCACTAC TACGAGCGCG CGCTGACGCT GCTGCGCCCC 
GGCGGCCTGG TCGTCGTGGA CAACACGCTC TTTTTCGGGC GGGTCGCCGA TCCGTCCGCG 
ACCGATCCGG ACACCACCGC CGTGCGCGAG CTGAACGCGC TGCTGCACGC CGACGAGCGG 
GTCGACATGT GCCTGCTGCC GATCGCGGAC GGAATCACGC TCGCCGTGAA GCGGTGA
 
Protein sequence
MAQQISATSE ILDYVRATSL RDDDVLAGLR ERTAVLPAAS ALQVAPEEGQ LLGLLVRLVG 
ARSVLEVGTY TGYSTLCMAR ALPPGGRVVT CDVVAKWPDM GRPFWERAGV ADRIDVRVGD 
ARATLAGLHA EHAVFDLVFI DANKSDYVHY YERALTLLRP GGLVVVDNTL FFGRVADPSA 
TDPDTTAVRE LNALLHADER VDMCLLPIAD GITLAVKR