Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3179 |
Symbol | |
ID | 8327369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 3671497 |
End bp | 3676278 |
Gene Length | 4782 bp |
Protein Length | 1593 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 644943696 |
Product | Acyl transferase |
Protein accession | YP_003100936 |
Protein GI | 256377276 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3321] Polyketide synthase modules and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.821587 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGACG GGACCCACGA GAAGCTGGTC GACTACCTCC GGTGGGTCAC CGCCGACCTG CACGAGACGC GGCGCAAGCT CGCCGACCTG GAGTCGGCGG GCCACGAGCC GATCGCGATC ACCGGCCTGG CCTGCCGCGC CCCCGGCGGC GTCCGCACCC CGGAAGCGCT GTGGGAACTG GTGGACGGCG GCGTCGACGC GATCACCGGG TTCCCCACCG ACCGCGGCTG GGACCTGGCC GGGCTCTACG ACCCCGACCC GACCCGGCCG GGCACCTGCT ACACCCGCGA GGGCGGGTTC CTGCACGACG CCGCCGAGTT CGACGCCGGG TTCTTCGGCA TCGGCCCGCG CGAGGCCGTC ACGATCGACC CGCAGCACCG GATGCTCCTG GAGACCTCCT GGGAGGCGGT CGAGCGCGCG GGCATCGACC CGCTGTCGCT GCGCGGCACC GGCACCGGCG TCTTCTCCGG CGTGGTCTAC CAGAACTACG GCAACCGGCG GCGCGTCGCC GAGGAGTTCG AGGGCCACCT GGCCATCGGC AGCTCCGGCA GCGTCGCCTC CGGCCGGGTC GCCTACGCGC TCGGCCTGCA CGGGCCCGCG ATCACCGTGG ACACCGCCTG CTCGTCGTCG CTGGTCGCGA TCCACCTGGC CGCGCAGTCG CTGCGGCGCG GCGAGTGCGC GATGGCGCTG GCGGGCGGCG CGACGGTCAT GCCCCTGTCG GACGTGTTCG TGGAGTTCGC CCGGCAGCGC GGACTGTCCC CGGACGGCCG CTGCAAGGCG TTCTCCGCCG ACGCCGACGG CACGGCGTGG GGCGAGGGCG TCGGCGTGGT GCTGCTGGAG CGGCTCTCGG ACGCGCGCCG CGCCGGGCGG CCGGTGCTGG CGGTGGTCCG GGGCAGCGCG GTCAACTCCG ACGGCGCGTC CAACGGGCTG ACCGCGCCGA ACGGGGCCGC GCAGCAGCGC GTCATCGAGG CGGCGCTGGA GGACGCGGGG CTGCGGCCGT CCGACGTGGA CCTGCTGGAG GCGCACGGCA CCGGCACCCG CCTCGGCGAC CCGATCGAGG TGGCGGCGCT CCAGGCCACC TACGGGCGCG CCAGGCCAGG GGGCAGGCCG CTGCTGCTCG GCTCGCTCAA GTCCAACATC GGGCACGCCC AGGGCGCGGC CGGGGTGCTG GGGCTGGTCA AGGTCGTGCA GGCGCTGCGC CACGGCGTGG CGCCGCGCAC CCTGCACGCC GACCGGCTCA CCCCCGAGGT CGACTGGGGC TCCGGCGCGC TGCGGGTGCT GACCGAGCCC GCGCCGTGGC CGCGCGGGGA GCGGTCCCGG CGCGCGGCGG TGTCCGCGTT CGGCATGAGC GGGACCAACG CGCACCTGGT CGTGGAGGAG GGCGACGCGC CGACCGGGCC GGGGGAGCGG CGTCCGGCGG GCGCGCTGCC GCTGCTGCTG TCCGCGCGCG GGGGCGCGGC GCTGCGCGCG GCGGCGGCCG ACCTGGTCGA GCTGCCGGGG GAGCCGGTGG ACGTGTGCTG GTCGCTGCTC ACCGGCCGCG CCCGGCTGGT CGACCGCGCC GTGGTGGTCG CCGCCGACCG GGCCGGGTTC ACCGCCGGGC TCCAGGCGCT GGCAGCCGAC CAGCCCTCGG CCGCCGCGGT GACCGGCCGG GCGGACGTGT CGGGCCGCAC GGTGCTCGTG TTCCCCGGAC AGGGCGGCCA GTGGGTGGGC ATGGGGGCCC GGCTGCTGGA CGAGTCGCCG GTGTTCGCGG CGGCCGTGGC GCGCTGCGCG GCGGCCGTGG AGCGGCTGGT GGACTTCCGG GTGGTGGACG TGCTGCGCGG CGGCGACCTC GGCCGGGTGG ACGTGGTGCA GCCGGTGTCG TTCGTGGTGA TGGTGGCGCT GGCCGACCTG TGGCGCTCGT TCGGCGTGGC CCCGGACGTC GTCGTGGGCC ACTCGCAGGG CGAGATCGCG GCGGCCTGCG TGGCCGGGGC GCTCTCGCTG GAGGACGCGG CGCGGGTGGT CGTGCTGCGC AGCCGGGCCA TCGCCGTCGG GGTGGGCGGT GCCGGGCTGG AGGGCGGCGG CATGGCGTCG ATCCCGCTGC CGCGCGCGGA GGTCGAGGAG CTCATCACCG GCACGGGGGT GTCCGTGGCG GCGGTCAACG GCCCCGGTTC GGTGGTCGTC TCCGGCGACG TCGACCCGCT CGTGGCGCGG GTGGAGGGCG CGCGCAGGCT GCCGGTGGAC TACGCCTCGC ACTCGCCCGC CGTGGACGTG CTGCGCGGGC GCCTGCTGGC CGACCTCGCC CCGATCACGC CCCGACCCGC GACGGTCCCG ATGCTGTCCA CCGTCACGGG CAAGTGGCTG GACGGCGCGG AGCTGGACGC GGACTACTGG TTCGCCAACC TGCGCGAGCC CGTCCGCTTC GCCGACGCGG TCACCGAGCT CGCCGGGGCG GACTGCGCGG TGTTCGTGGA GGTCGGGGCG CACCCGGTGC TCACCGCCGC GATCCAGGAC GTCCTGGGCG AGCGGACCGC CGTCGTCACC GGCACGCTGC GCCGCGGCGA CGGCGGCCTC GACCGGTTCC TGCGCTCCGC CGCCGCGCTG CACGTGCGCG GCGTGCCCGT CGACTGGGCC CCGGTCTTCG ACGGCCTGGA CGCCCACCGC GCCGACCTGC CCACCTACCC GTTCCAGCGC GCCCACCACT GGCTCCAGGA GGCCGAACCC GCCGCCACCC CGGCGGGCGG CGACGACCCG CTGTGGGCGG CGGCGCGCGA CGCCGACGGC CTGTGCGCCG AGCTGGAGCT CACCGAGCCC GACCAGCGCG CCGCGCTGCG CGCCGTCCTG CCCGCGCTGA CCGCCTGGCA CGAGCGCAGG AGCGAGCGGG CCCTGCTCGA CTCCTGGCGC TACCGGATCA CCTGGCGCAC CCTGCCCGAG CCGCCCGAGG CCGACCCGCG CGGCGACTGG CTCGTCGTCG GGCCGCACCC CGACCTGCTG CCCGGCGTCG CGCTCGACCC CGACCGCGCC GCACTCGCCG ACCGCGCCGC ACTCGCCGAC CTGCTCCGCC CGCACGCCGC CGTCGCGGGC GTCCTGGCCA CGCCGGGCGC CGACGTGCTC GCCCTGGTCC AGGCGCTCGG CGACGCGGGC GTCACCGCGC CGCTGTGGTG CGCCACCACC GGGGCCGTCG CGATCTCCCC GCACGACGGC CCGCCGGACC CCGCCCAGGC CGCCACCTGG GGCCTGGGCC GGGTCGTCGC GCTGGAGCAC CCCGGCCGCT GGGGCGGGCT GGTCGACCTC GCCGACCCCG CCGACCCGCG CCAGCGCCGC AGGCTCGCCG CCGTCCTCGC CGGACCCGGC GTCGACGACG GCGGCGAGGA CCAGGTCGCC ATCCGCGCGG AGGGCGTGTT CGCGCGCAGG CTCGTGCGCG CCGAACCGCA GGCCCCGGCC GCCCCGTGGA CCCCGCGCGG CACGGTCCTG GTCACCGGCG GCACCGGCGG CGTCGCCGCG CACGTGGCCC GCCGCCTCGC CGCCCTCGGC GCCGACCACC TCGTCCTCAC CAGCCGCCGG GGCCCGAGCG CCCCCGGCGC GCCCGCGCTC GCCGCCGACC TGGAGGCGCT GGGCTCCCGC GTCACCACCG CCGCCTGCGA CGTCGCCGAC CGCGCCGCGC TCGCCGCCCT GCTGGCCGAC CTGGAACGCG CGGGCGACCA GGTCACCGCC GTCGTGCACG CGGCGGGCGC CAACGCCCAG ACCCCCGTCG CCGACACCAC CCCCGAGGAG CTCGCGCGCG TCCAGGCCGC CAAGGCGCTC GGCGCCGAGC ACCTGGACGA GCTGCTGGGC GGGCGCCCGC TCGACGCGTT CGTCCTGTTC TCCTCCAACG CGGGCGTGTG GGGCAGCGGC GGCCAGTGCG CCTACGCCGC CGCCAACGCC CGCCTCGACG CCCTCGCCCA GCGCCGCCGC GCGCACGGCC GCGTCGCCAC CTCCGTCGCC TGGGGCGCCT GGGACGGCGG CGGCATGTCC AGCGCCACCC CGGACATCGC CGCCCAGCTC GCCCAGGCGG GCCTGCGCCT GATGCCCCCG GACCTGGCGG TGTCCGCGCT GCTCGACGCC GTCGCCCGCG ACGAGACCAC CACCGTCGTC ACCGACGTGC GCTGGGAGGC GTTCGCCGCC CGGTTCACCG CCCTGCGCCG CAGCCCCCTG CTCGCCGACC TGCCCGAGGC CCGCCCCGAA CCGGTCGCCG CCGCCGACGA GCCCGACCGG GGGCTCGCGG GCGAGCTGGC CGCGCTGCCC GCGCCCGAGC GGCTGCGCAG GCTCACCGAC CTGGTGCGCG CGCACGCCGC CGCCGCGCTC GGCCACCCAG GGCCCGAGTC GGTGCCCGCC GACGTGGCCT TCCGCGACCT GGGTGTGGAC TCGCTGGCCG CCGTCGAGCT GCGCAACCGC GCCTCGGCCG CGACCGGCGC GAGGCTCACG CCCACCGCCG TCTTCGACCA CCCCACCCCG CGCGCGCTCG CCGCGCACCT GGCCGAGCAC CTCGCCGCCA CCAAGGACAG CTGGGCCCCG GACGCGGCCC CGGACATCCA GGACCCCACG GCCGCGCTGC GCGGCCTAGA CGCCCTCGCC GCCGCCCTGC CCGCCGCCGC GGGCGACGAC GCGCTGCGCG AGCGGGTCAC CGCGCGCCTG CGCGAGGTGC TGGGCCGCTG GGACGAGCTG ACCGGCGACC CCGGCGGACC CGACGGGTTC GACCTCGACC ACATCAGCGA CGACGAGCTG TTCCGCCTGG CCGACAGCAG GCTCGGCCCG ACCGGCGCCT GA
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Protein sequence | MTDGTHEKLV DYLRWVTADL HETRRKLADL ESAGHEPIAI TGLACRAPGG VRTPEALWEL VDGGVDAITG FPTDRGWDLA GLYDPDPTRP GTCYTREGGF LHDAAEFDAG FFGIGPREAV TIDPQHRMLL ETSWEAVERA GIDPLSLRGT GTGVFSGVVY QNYGNRRRVA EEFEGHLAIG SSGSVASGRV AYALGLHGPA ITVDTACSSS LVAIHLAAQS LRRGECAMAL AGGATVMPLS DVFVEFARQR GLSPDGRCKA FSADADGTAW GEGVGVVLLE RLSDARRAGR PVLAVVRGSA VNSDGASNGL TAPNGAAQQR VIEAALEDAG LRPSDVDLLE AHGTGTRLGD PIEVAALQAT YGRARPGGRP LLLGSLKSNI GHAQGAAGVL GLVKVVQALR HGVAPRTLHA DRLTPEVDWG SGALRVLTEP APWPRGERSR RAAVSAFGMS GTNAHLVVEE GDAPTGPGER RPAGALPLLL SARGGAALRA AAADLVELPG EPVDVCWSLL TGRARLVDRA VVVAADRAGF TAGLQALAAD QPSAAAVTGR ADVSGRTVLV FPGQGGQWVG MGARLLDESP VFAAAVARCA AAVERLVDFR VVDVLRGGDL GRVDVVQPVS FVVMVALADL WRSFGVAPDV VVGHSQGEIA AACVAGALSL EDAARVVVLR SRAIAVGVGG AGLEGGGMAS IPLPRAEVEE LITGTGVSVA AVNGPGSVVV SGDVDPLVAR VEGARRLPVD YASHSPAVDV LRGRLLADLA PITPRPATVP MLSTVTGKWL DGAELDADYW FANLREPVRF ADAVTELAGA DCAVFVEVGA HPVLTAAIQD VLGERTAVVT GTLRRGDGGL DRFLRSAAAL HVRGVPVDWA PVFDGLDAHR ADLPTYPFQR AHHWLQEAEP AATPAGGDDP LWAAARDADG LCAELELTEP DQRAALRAVL PALTAWHERR SERALLDSWR YRITWRTLPE PPEADPRGDW LVVGPHPDLL PGVALDPDRA ALADRAALAD LLRPHAAVAG VLATPGADVL ALVQALGDAG VTAPLWCATT GAVAISPHDG PPDPAQAATW GLGRVVALEH PGRWGGLVDL ADPADPRQRR RLAAVLAGPG VDDGGEDQVA IRAEGVFARR LVRAEPQAPA APWTPRGTVL VTGGTGGVAA HVARRLAALG ADHLVLTSRR GPSAPGAPAL AADLEALGSR VTTAACDVAD RAALAALLAD LERAGDQVTA VVHAAGANAQ TPVADTTPEE LARVQAAKAL GAEHLDELLG GRPLDAFVLF SSNAGVWGSG GQCAYAAANA RLDALAQRRR AHGRVATSVA WGAWDGGGMS SATPDIAAQL AQAGLRLMPP DLAVSALLDA VARDETTTVV TDVRWEAFAA RFTALRRSPL LADLPEARPE PVAAADEPDR GLAGELAALP APERLRRLTD LVRAHAAAAL GHPGPESVPA DVAFRDLGVD SLAAVELRNR ASAATGARLT PTAVFDHPTP RALAAHLAEH LAATKDSWAP DAAPDIQDPT AALRGLDALA AALPAAAGDD ALRERVTARL REVLGRWDEL TGDPGGPDGF DLDHISDDEL FRLADSRLGP TGA
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