Gene Amir_3175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3175 
Symbol 
ID8327365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3664718 
End bp3665968 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content77% 
IMG OID644943692 
Productsodium/hydrogen exchanger 
Protein accessionYP_003100932 
Protein GI256377272 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGGCCC CGGCGGGGGA CTCGCTCGTC GCGCTGCTGT TCCTCGACCT CGCGGTCGTC 
CTCGCGCTCG GCGCCCTGCT CGGCGCGCTG GCCAGGCGGC TGGGGCAGCC CTCGGTGGTG
GGGGAGGTAG CGGCCGGGAT CGCGCTCGGC CCCAGCCTGC TCGGCCTGCT GCCCGGCGAC
CCGGTCGCGC TGCTGTTCCC GCCCGAGGCG CGCCCGCCGC TCGCGTTCGC CGCCCAGCTC
GGCCTGGTGC TGTTCATGTT CCTGGTCGGC TGCGAGCTGG ACGTCGCGGA GCTGCGCGGC
GCGGGACGGG TGGTCGGCGC GGTGTCGGCG GGCTCGGTCG TGCTGCCGTT CTGCCTCGGG
CTGGGCGTCG CGGCGCTGCT GTGGCCGCGG GGCGGTGACG CGCTCGCGCT GTTCACCGCC
GCCGCCCTGT CGATCACCGC TTTCCCCGTG CTGGCGCGGA TCCTGGCCGA GCGGCGGATG
CAGCGCACCC GGTCCGGGGT GGTCGCGCTG GCGAGCGCGG CGGTGAACGA CGTGGTGGCG
TGGTGCGCGC TCGCCGTCGT CGCCGGGATC GTGACCGCGC GCGGCCCGTG GTCGGCGGTG
GCCACGCTGG CCTGGACGGC GGCGCTGGTG CTGGTGGCGG TGCTCCTCGT CCGGCCGCTG
GTGGGGTGGG CGGCACGGGC GGTGGGCGGC TCGCCGCGCG CGGACGCGGT GCTGTTCGCG
GTCGTCGTCC AGGGGCTGCT GCTGTTCGCG CTCGCCACCA CGGCCATCGG CCTGCACGCG
GTGTTCGGGG CGTTCCTGTT CGGGGCGGTC GTGCCCAAGG ACGCGCTCCG GGAGGCCGCG
CCGACCCTGG TGGACCGGGT CGGGGGGCTC AGCTCCCTGC TGCTGCCGGT GTTCTTCGTC
GTGGCCGGGC TGTCCGTGGA CGTCGGCGGC CTCGGCTGGT CCGGCGCGGG GGAGGCGCTG
CTGGTGCTCG TCGCCGCGTG CGTAGGCAAG CTGGTCGGCG CGGCGGGCGG CGGTCTGCTC
GCGGGGCTGC CCGCGCGCGA CGCGGCCGAG GTCGGCGTGC TGATGAACGC CAGGGGGCTC
ACCGAGCTGG TGGTGCTCGG CGTGGGGCTG GAGCTGGGGG TGCTGGACGG TCACCTGTTC
ACCGTCCTGG TCGTGATGGC TCTGGTGACG ACGGCGGCGA CCGGGCCGCT GCTGACGCTG
ATCGCCCGGC GGTCCGGGCG GGAAGCGTCT GCGCTCGGGG GGGTTCGGTA G
 
Protein sequence
MAAPAGDSLV ALLFLDLAVV LALGALLGAL ARRLGQPSVV GEVAAGIALG PSLLGLLPGD 
PVALLFPPEA RPPLAFAAQL GLVLFMFLVG CELDVAELRG AGRVVGAVSA GSVVLPFCLG
LGVAALLWPR GGDALALFTA AALSITAFPV LARILAERRM QRTRSGVVAL ASAAVNDVVA
WCALAVVAGI VTARGPWSAV ATLAWTAALV LVAVLLVRPL VGWAARAVGG SPRADAVLFA
VVVQGLLLFA LATTAIGLHA VFGAFLFGAV VPKDALREAA PTLVDRVGGL SSLLLPVFFV
VAGLSVDVGG LGWSGAGEAL LVLVAACVGK LVGAAGGGLL AGLPARDAAE VGVLMNARGL
TELVVLGVGL ELGVLDGHLF TVLVVMALVT TAATGPLLTL IARRSGREAS ALGGVR