Gene Amir_3145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3145 
Symbol 
ID8327335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp3632037 
End bp3632759 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content77% 
IMG OID644943663 
ProductB3/4 domain protein 
Protein accessionYP_003100903 
Protein GI256377243 
COG category[S] Function unknown 
COG ID[COG3382] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACG CCCCCGACCT GAAGCGGTTC CTCGCCGACG CCCGGATCGA CCCCGAGGTG 
CACGCCCTGC GCCCGGACTA CCGGGCCGCG CTGCTCGTCG TCGACGGGAT CGACCCCGCC 
GCGAGCACCG CGCTCGGGGA CGCGCTGGTG GCCGAGGCCG AGGCGAGCGC CCGCGAGTTG 
CTCGCCGCCG GGCCCGTGGA GGAGGAGCCG CACGTCGCGG CGTGGCGGGA GGCGTACCGG 
GGGTTCGGCG CGAAGCCGCA GCGCACCCGC AACAGCCTCG AAGCGCTGCT GCGGCGCGCC 
GGTGACGCCG GGCTGCCCAG GGTCAACGCG CTCACCGACG TCTACAACGC GATCTCGGTG 
CTGCACCGGG TCCCGCTCGG CGGCGAGGAC CTGACCCGGT ACCGGGGGGC CGCCCGCCTG 
GTCCGGGCCA CCGGCGCGGA GGAGTTCGAC ACGGTCGCGG GCGGTGTGGA GGTCGTCGAG 
CACCCGGAGC GGGGCGAGGT GGTGTGGCGC GACGACGCCG GGGTGACGTG CAGGCGGTGG 
AACTGGCGGC AGGGGCGGCG CACCGCGCTG ACCGGGGGCA CCACGGCGGC GCTGTTCATC 
CTGGACGCGC TGGCCCCGAT GGACGACGCG GCCCTGGACG CCGCGGTCGA GAACCTCGCG 
ACGGCGCTCG GCGGGCTGGG CGCGGACGTG ACCGCGGCGA CCCGGACCGT GGGCGCGGCG 
TGA
 
Protein sequence
MTDAPDLKRF LADARIDPEV HALRPDYRAA LLVVDGIDPA ASTALGDALV AEAEASAREL 
LAAGPVEEEP HVAAWREAYR GFGAKPQRTR NSLEALLRRA GDAGLPRVNA LTDVYNAISV 
LHRVPLGGED LTRYRGAARL VRATGAEEFD TVAGGVEVVE HPERGEVVWR DDAGVTCRRW 
NWRQGRRTAL TGGTTAALFI LDALAPMDDA ALDAAVENLA TALGGLGADV TAATRTVGAA