Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3134 |
Symbol | |
ID | 8327324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 3620477 |
End bp | 3623104 |
Gene Length | 2628 bp |
Protein Length | 875 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644943652 |
Product | aminotransferase class-III |
Protein accession | YP_003100892 |
Protein GI | 256377232 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTCGGAC ACCTCGCCAG AGCGGTCGCG GCCCTCGCGC TGGAGGCCGC CCGCCACCTG CTCGTGCCCG CACTGCGCGG CCGTCGGGAG AGCGGCAGGC AGCGGCGCAG GGCGCGGGCC GCGCTGGCGT TCCTGGTGCG CATGGGGCCG ATCTACATCA AGCTCGGCCA GATCGCCGCC ACCCGCTCCG ACCTGCTGCC CCCGGAGTGG ACCGACACCC TGCGCGCCCT GCAGGACCGC GCCCCGCACA TGCCGCCCGG CCCCACCCGC CGCGCGCTGG AGCGCGAACT GGGCGGCCCG CTGGGCGAGG TGTTCCGCGA CCTCGACCTG CGCCCGATCG CCAGCGCCTC CGTCGCCCAG GTGCACGTCG CGCACCTGCA CGACGGCCGC AAGGTCGCCG TCAAGCTGGT CAAGGACGGG GTGCCCGAGG AGATCCGGCG CAGCCTGCGC GCGCTCGGCT CGCTCGTGCG CGCCGCCCAC CTGCTCGTGC CGCGCCTGCG CCACCTGGAC CTGCCGCACC GCTTCGACGA GGTCGCCCGC CTGCTGCTGC CGCAGGCCGA CATGCGCCGC GAGGCCCACC AGCAGCAGCG GGTGCGCGCC GACTTCGCCG GGCACCCGCA CGTGCGCGTG CCCGAGGTGG TGCCGGAGCT GGTGACCACG CGGGTGCTCG TGATGGAGCA CGTCGACGGC ATCCCCGGCC GCGACGCGCA CCTGGTCGAG CTGCCGCGCG CCCAGCTCGC CCGCCGCCTG CAGGACGCCG TCTACACGAT GCTCTACATG CACGGCCTGA GCCACGGCGA CCCGCACCCC GGCAACGTGC TGTTCACCCC GACCGGTGAG CTGGTGCTGC TCGACTACGG CGTCACCGCC GAGCTGACCG AGGACGAGAA GTGGGGCCTG TCCTCGTTCT ACTACGCCTG CACCCGCAAG GAGTGGGCCG TCGCCGTGGA CCGCTTCACC CGGCACTTCG TGCACGCAGG CCCCGGCCTC GCGGCCCGGC GCGCCGGGTA CGAGCGGCGG ATGGCCGAGG TGTTGCGCCA CCACTTCGAC ACCAGCACCG ACCGGTGGTC CACCGTCGCG TACTTCGCCG ACGTCAACGA GGTGCTGCGC GCGCACGGCT GCCGGTACAC CACCACGTTC ACCAAGGTCG AGCTGGTGTT CCTGTCGTGC GAGGGCTTCG CGGGCCAGAT CGACCCGGAC ATCGACATCT GGGCCAACGC CCGCAGGTTC ACCGACCGCT ACTCGCCCTA CATGAGCGCC GAGGTGGAGG AGCGGTTCGC CGAGGACTTC GCGGTGCGCG CCCCCACCTC GCTGCGGCTG CGCGAGCGCG CCCGCTCCAC GCTGGTGGCC CCGACGCACA TGGACCGGTA CTTCTTCCCC AGCGCGTTCC CGGTGTTCGT GCGGGAGGCG TCGGGCGGGC GGGTGCGGGA CTTCGACGGC AACGAGTACG TCGACCTGTG CGGCGGTTAC GGGCCCCACC TGCTGGGGTA CGCGCACCCG GACGTGGTCG CGGCGGTCAC CGAGGGCGTG CGGCGCGGGC AGGTCAACGG GGTGGGCAAC CTGCCCGAGG TGGAGCTCGC CGAGCTGCTG GTGGCGGCGC TGCCCGGCGC GGAGCGCGCG GTGCTCTGCA ACTCCGGGTC CGAGGCGGTG CTGCTGGCGA TCCGGATGTG CCGGGGCGCG CGCGGCGGGC GCGCCAAGGT CGCCAAGTTC GAGGGGCACT ACCACGGGCT CTCCGACCAG GGCCTGGTCA GCTCGTGGTT CCGCTTCGCG GGCGAGCGCG ACCGGCCCGA ACCGGTCGCG GGCTCGCACG GCGCCGACCC CGCCGCCGTC GCGGGCACGC TGGTGCTCCA GTACGGCGAC GTCCCCGGCC TGGAGCGGTT GCGGGAGCAC GCGGACGAGC TGGCCTGCGT GCTGCTGGAG CCGATGCCCA CGTCGGTGGT CGCGCTCGAC CCGCCGTTCC TGCTGGCGCT GCGCCGGGTG TGCGACGAGA TCGGTGTGCC GCTGGTGTTC GACGAGGTGG TCAGCGGGTT CCGGGTCGCC TACGGCGGGG TGCAGTCGGT GGTGGGCGTG CGGCCGGACC TGACCTGCCT GGGCAAGGTG ATCGGCGGCG GGCTGCCGTG CGGGGCGGTG GTGGGGCGGG CCGGGCTGGT CGACGTCGCC AGGAGCACCC GCGACCCGTT CCAGGACTAC GAGCGCAAGG TCTTCGCGGG CGGCACGCTC AGCGGCAACT CGCTCAGCTG CGCCGCCGGG GCGGCCGTGC TGCGGCGGCT GCGCGCCGAC CCCGGCGTCT ACGCGCGCTT GGAGGCCGGG ACCGAGCGGC TCGCCGGGGC GCTGCGCGAG GCCGCCGGGC GGCGCGGGAT CGCCTGCCGG GTCTCGGCGC GCAGCTCGAT CTTCTCGCTG ACCTTCAGCC ACCGCCCGGC GCGGCTGTAC CGGGACCGGC TGACCGGCAG CGACTTCAAG GCCACGATCG CGCTGGCGTA CTACATGCGC AGGCACGGGG TGCATTTGCC GGAGCTGCAC GCGTTCCTGA TCAGCGCCGC GCACACCGCC GAGGACCTGG AGCTGGTGGC CGACGCGTTC GCCAAGAGCT TGGACGAGAT GACCGCGGAT GGGTTCTTCG GAGTGTGA
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Protein sequence | MLGHLARAVA ALALEAARHL LVPALRGRRE SGRQRRRARA ALAFLVRMGP IYIKLGQIAA TRSDLLPPEW TDTLRALQDR APHMPPGPTR RALERELGGP LGEVFRDLDL RPIASASVAQ VHVAHLHDGR KVAVKLVKDG VPEEIRRSLR ALGSLVRAAH LLVPRLRHLD LPHRFDEVAR LLLPQADMRR EAHQQQRVRA DFAGHPHVRV PEVVPELVTT RVLVMEHVDG IPGRDAHLVE LPRAQLARRL QDAVYTMLYM HGLSHGDPHP GNVLFTPTGE LVLLDYGVTA ELTEDEKWGL SSFYYACTRK EWAVAVDRFT RHFVHAGPGL AARRAGYERR MAEVLRHHFD TSTDRWSTVA YFADVNEVLR AHGCRYTTTF TKVELVFLSC EGFAGQIDPD IDIWANARRF TDRYSPYMSA EVEERFAEDF AVRAPTSLRL RERARSTLVA PTHMDRYFFP SAFPVFVREA SGGRVRDFDG NEYVDLCGGY GPHLLGYAHP DVVAAVTEGV RRGQVNGVGN LPEVELAELL VAALPGAERA VLCNSGSEAV LLAIRMCRGA RGGRAKVAKF EGHYHGLSDQ GLVSSWFRFA GERDRPEPVA GSHGADPAAV AGTLVLQYGD VPGLERLREH ADELACVLLE PMPTSVVALD PPFLLALRRV CDEIGVPLVF DEVVSGFRVA YGGVQSVVGV RPDLTCLGKV IGGGLPCGAV VGRAGLVDVA RSTRDPFQDY ERKVFAGGTL SGNSLSCAAG AAVLRRLRAD PGVYARLEAG TERLAGALRE AAGRRGIACR VSARSSIFSL TFSHRPARLY RDRLTGSDFK ATIALAYYMR RHGVHLPELH AFLISAAHTA EDLELVADAF AKSLDEMTAD GFFGV
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