Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3123 |
Symbol | |
ID | 8327313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 3607447 |
End bp | 3611625 |
Gene Length | 4179 bp |
Protein Length | 1392 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644943642 |
Product | hypothetical protein |
Protein accession | YP_003100882 |
Protein GI | 256377222 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGCTT CCGAGCCCTT CGACGTCGGT GGACCGGGCT CGCCGGGCGC GGGACTGCTG CGGATCTCCA CGCACTCCGG GCAGCCGGTG GGACTGGGTT TCCTGATCAC CGACCGGGTG GCGCTCACCT GCGCGCACGT GCTGGCCTCG GCGCTGGGCG GCCACCCGTC CGCAGGTTCC CCGGTCGTGG TGGACCTGCC CCTGCTCACC ACGGGGGCGC CCCTCGCCGG GCGCGTCGAG TGGTGCTCGC CCCCCGACGG CGACGACCTC GCCCTGCTGG TCGTGGACGC CGCCCCGCCC GGCGCACGCC CCCTGCGGCT GGTGCGGGTG GACGAGCCGT GGGGGCGTCC CGTCCGGGTC TTCGGGCTTC CCGCCGGACG ACCCGGCGGG GTGTGGCACA GCGGGGTGCT GCGCGAGCGG CAGGCCGACG GCTGGGTCCA GGTCGACCTG GTGGGGGAGG GCTACCGCAT CTCGCCCGGT TTCAGCGGCG GGCCGGTGTG GGACGAGGAG TCGGCCGGGG TGGTCGGGGT GGTGGTGGCG GCCGAGGCGC GCACCCCGCC CGTCGGGTAC CTCGTCCCCA CCTCGGCGGT GCTCGACGCC CGCCCCGACC TGCGCCCGCT GGTGCTGCCG TCCTCCCCCT TCCGCGGGCT GCGCCCGTTC ACCGAGGCGG ACGCGGCGCT CTTCCGCGGC AGGCGTGCGG AGAGCGCCGA GGTGGCGGAC CTGGTCGGGA CGCGGCGGTG GACCACGCTG GTCGGGCCGT CCGGCTGCGG CAAGTCCTCG CTGGTGCTGG CCGGGGTCCT CCCGCGACGG CGCGCGGCGG GCGACCTGCC CGCGGTGCTG CGGCCCGGCC ACCACGCCAG CCCCGTGCAC GCGCTGGCCG CCGCGCTCGC GCCGCTGCTG GAACCGGGGC TGGAAGGCGC CCGGTTGATC ACCGAGACCG CGAGCCTGGC TCGGGTGCTG GCCGGGGACG GGTTGCGCGC CCTGGCGCCC CCGCTGCTGG AGCGGCACGG CGCGGACCGG CTGCTGGTGG TCGTGGACCA GTGCGAGGAG CTGCTGGCGC TCCCGCCCGC CGAGGTCGAC GCGCTGGCGG AGGCGCTGTT CGGCGACCGC GTCCCGCAGG AGGTCGCGGT CCTGTGCGCG CTGCGGGCGG ACTTCCTCGA ACCGGCGCTG GCCCACCCCC GGCTCGGACC GGTGCTGGGC AGGCGCGTGC ACGCCCTGGC GCCGATGCGC GCGGACCAGC TGCGCGAGGT GGTCACCGGC GCGGTGGACG GCACCCCCGG CGTGCGCTAC CAGCCGAACC TGGCCGACCG CGTGCTCGCC GACGCCGGGG ACGGGCCGGG GGCGCTGCCG CTGCTCGGCT TCACCCTCGC CCTGCTGTGG GAGCGGCAGG AGCGCGGCGT GCTCACCCAC CACGCCTACG ACGGGATCGG CGGCGTCGCG GGCGCGCTGG GCGGCTACGC CGAGGCCGCC TGGGCCCGCG TGGAGGACGA CCCGGCCGCC GAACGCCTGC TCACCAGGCT GGTGCGCCTG CCCCTCGGCG CGCCCGCCGC GACCAGGCGG GCCGTGCCCC GCGCCGAGCT GGACCCCGAC GAGCTGCGCG CGGCCCGACT GCTGGCCACC ACCAGGCTGC TCGCGCTCAC CGACGACGAC CGGGTCGAGC TGGCGCACGA GGCGCTGATC GCCCACTGGC CCCGGCTGGT CAGGCTGATC GCCGACCGGA GGGCCTTCCT GGACTGGCGG GAGTCGCTGC GCTACGACCT GGAGCGCTGG ACCCGCGCGG GCGCCCCGCC CGACCTGCTG CCCAACGCGA CCGCGCTGGC CGCCGCGCGG CAGTGGCTGC CGGGCCACGC CGCCGACCTC GCCGTGCCGG AGCGCGACTA CCTGCGTCGC GGCCACCGGC GCCAGCGCGC CAGGACGCGG GGCAGGCGGG CCTGGCTCAC CGCCGCGGTG CTGCTGCTGG TGACGGCGGT GACCGCGGGC GCCTTGCTCG TCTCCACCCG GCGGGAGAGC GACGAGCGGC GGGCGCTGGC CGAGTCCAGG GCGCTGGCCC TGGCCGCGCA GGACGTCGTC GGGTCCGACC CGGCCCTGTC GGTGATGACC GCGCTGGCCG CGTACCGGCG TTCACCGACG CGGGAGGCGC GCGACCAGCT CCTCCAGCAC CGCCTCAGGC ACGCGACGGC CACCCGCGTG CTGTCCGGGG CGCCGGGCCC GCTGGCGACG GCCGAGACCA GCCGGGACGG CGACGTCGTG CTCACGGTCA CCGACGTCGG CCGCACGACG CTGACCGTCC ACGCGGCGAC CGGGGAGGTG CGCAACGCCG AGGTCCCCGT CCAGCACGTG CTGTACGCCC TGGTCGCGCC GGACGGGAAG CGGGCCGCGT TCGTGGAGGA CGACGGCGAC GCGGGCTGGT TCGAGGTGCG CCCCGACGCC GAGCGGATCG TCGGGCAGGT GCGCCGGCTG CCGAGGGCGG TGGGGCTCAA GGCGTTCACC CAGCACCCGC ACGACTCGGC GGCGATCTCC GCCGACGGCG GGCTGGTCGC CGTCACCACC GGGGACCGGT TGCTCTGGTG GGACCTGGAC GCGGGCACGG TCGCCGGGAC CGCGCCGCTG CCCCTCGACG CGGGCAACGG GCTGTGGTTC GGGGCGGACG ACCGGACCCT GCTCGTCAAG ACCTTCCACG ACGTGGGCGC CGCGTCCGCC GAGGGACTGG TGGCCGCCGA CCTGGCCACC GGGGAGGTCC GCAGCGTGCT CGACCCCGTC GTGGACCGGG AACTGCTGGT GTCCGGTGAC CGGACCGGCG TCGTGACCTG CAGGAGGGAC GAGTCGGGGG GACGGGTCCA GCTCCTGCGG GTCGCCGACG GGATCGAGCT GGGCGCCGCG ATCCCCACCA CCCGGTGCGC CCTGGTGTCG ACCGACGCGA CGGGGCACCG CACCGTCGTG CGCGAGGACG GGCTGGTCCT GGTGGACCTC GGCGCGGGCG CGGTGGTCTC GGACGTCGTC CAGCGCGCGG CCGAGCGCCC CGTCGCGTTC CTGTCGGGGC TGGTCGAGTC CGGCGGCGAC CTGCTGCTGG GCGCGCTGCA CCCCTGGGGC GTCACCTACA CCACCCTGCC CACCGGGAAC CAGGTGCTGG ACGCGGACGA CGGGGTGCTC ACCCCCGACG GCGCCGGGAC GGTCACCCGG CTCACCGACG GCCGGCTCCA GCTGCGCCCC TCGGGCGAGG ACAGCGGTTC GCCGCTGGCC GAGCACCCAG GGACGCCGCC GCTCGCACCG CGCCTGCGCG AGCACCTCCT GGCCGTCGAC CCGTCCGGTG AGCTGCTGGT CAACCGCACG GGCGAGCACG AGATCACCGT CCACCAGCTC CCCTCCCTGC GGGAGCTGAC CCGGATCACC GCCGTCGCGC ACCCGCCCGA CCCCTCGGGG AAGGACGTGG GCTTCACCTA CCACTTCGAC CGGAACGGCG GCGTGGTGAC CGTCTCCGGC ACGGTGGTGC AGCAGTGGGA CGCGCGTCGG GGCGAGGAGC TCGCGCGCTT CGACGCGAAG GCCCTGCTCC CGCCCGGCGC CCCGCCCAGC GCGCTGGCCG TGGCCCCCTA CCCGCTGCAG GGCCACGTGG CCGTCCTGGT CCGGGAGGGG ACGACCGCCC ACGTGATCGA GTTGGCCACC GGGCGGACGA CCGGGACCGT CGAGGTGCCC CCGTACACCT ACGGCCTCCA GTTCGACCCC AGCGGTCGCT ACTTCGCGGT GCTGCGCACG GGCACCGCCG TGGAGCTGTG GCGGCGCGAT CCGCACCGCA GGGAGCTCGG GATCGGGAGC AGCCTGTCGA GCGGGAACGC CGCCGGGTGG CGGGCGGGGT TCCTCGACGA CGAGGGGCGC TACCTGGTCG CCGCGAACAA CGCCGTGCGC GTCTACCGGA TCGGCGACAA GGCCCCGGTC GACTCCTACG AGTTCGCCTT CCCCGACAGC GGGAACCACC ACTTCGTCGA CGTCTCCGCT GACGGGGGAA CGGTGCTCTA CCAGGAGGTG GGCGCGTTCG GCGGGCCGGG CGGACCGGGC GGCGCGCTGG CGCTCGACCC GGTGGCCTGG CAGCGCGACC TGTGCCGGGT CATCGGCGAC CGCGCCTTCA CCGAGGACGA GCGCGACGCC CTGCCGCCCG GCGTGGACTC CCTCCGGGTG TGCCGGTAG
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Protein sequence | MPASEPFDVG GPGSPGAGLL RISTHSGQPV GLGFLITDRV ALTCAHVLAS ALGGHPSAGS PVVVDLPLLT TGAPLAGRVE WCSPPDGDDL ALLVVDAAPP GARPLRLVRV DEPWGRPVRV FGLPAGRPGG VWHSGVLRER QADGWVQVDL VGEGYRISPG FSGGPVWDEE SAGVVGVVVA AEARTPPVGY LVPTSAVLDA RPDLRPLVLP SSPFRGLRPF TEADAALFRG RRAESAEVAD LVGTRRWTTL VGPSGCGKSS LVLAGVLPRR RAAGDLPAVL RPGHHASPVH ALAAALAPLL EPGLEGARLI TETASLARVL AGDGLRALAP PLLERHGADR LLVVVDQCEE LLALPPAEVD ALAEALFGDR VPQEVAVLCA LRADFLEPAL AHPRLGPVLG RRVHALAPMR ADQLREVVTG AVDGTPGVRY QPNLADRVLA DAGDGPGALP LLGFTLALLW ERQERGVLTH HAYDGIGGVA GALGGYAEAA WARVEDDPAA ERLLTRLVRL PLGAPAATRR AVPRAELDPD ELRAARLLAT TRLLALTDDD RVELAHEALI AHWPRLVRLI ADRRAFLDWR ESLRYDLERW TRAGAPPDLL PNATALAAAR QWLPGHAADL AVPERDYLRR GHRRQRARTR GRRAWLTAAV LLLVTAVTAG ALLVSTRRES DERRALAESR ALALAAQDVV GSDPALSVMT ALAAYRRSPT REARDQLLQH RLRHATATRV LSGAPGPLAT AETSRDGDVV LTVTDVGRTT LTVHAATGEV RNAEVPVQHV LYALVAPDGK RAAFVEDDGD AGWFEVRPDA ERIVGQVRRL PRAVGLKAFT QHPHDSAAIS ADGGLVAVTT GDRLLWWDLD AGTVAGTAPL PLDAGNGLWF GADDRTLLVK TFHDVGAASA EGLVAADLAT GEVRSVLDPV VDRELLVSGD RTGVVTCRRD ESGGRVQLLR VADGIELGAA IPTTRCALVS TDATGHRTVV REDGLVLVDL GAGAVVSDVV QRAAERPVAF LSGLVESGGD LLLGALHPWG VTYTTLPTGN QVLDADDGVL TPDGAGTVTR LTDGRLQLRP SGEDSGSPLA EHPGTPPLAP RLREHLLAVD PSGELLVNRT GEHEITVHQL PSLRELTRIT AVAHPPDPSG KDVGFTYHFD RNGGVVTVSG TVVQQWDARR GEELARFDAK ALLPPGAPPS ALAVAPYPLQ GHVAVLVREG TTAHVIELAT GRTTGTVEVP PYTYGLQFDP SGRYFAVLRT GTAVELWRRD PHRRELGIGS SLSSGNAAGW RAGFLDDEGR YLVAANNAVR VYRIGDKAPV DSYEFAFPDS GNHHFVDVSA DGGTVLYQEV GAFGGPGGPG GALALDPVAW QRDLCRVIGD RAFTEDERDA LPPGVDSLRV CR
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