| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2983 |
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| Symbol | |
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| ID | 8327172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 3448844 |
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| End bp | 3450121 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644943508 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003100749 |
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| Protein GI | 256377089 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGTCCA AGCGCCTCAC GGCCGTCGTC CTGGCCGCCT CGCTCGCCGC CGCCGGGTGC
GGGGGCAGCG CGGGAGACGA CGACAAGACC TTCAGGATCT GGCACTACGA GTCGCCGGAC
AGCGCGATGG CCATCGCCTG GAACAAGGCC GTCGACCAGC TCAAGCAGCG CCACCCCGAC
CTGAACGTCG TGGTGGAGGA GAAGGGCTTC GAGCAGATCC GCAAGACCGC GTCCATGGTC
CTCGGCTCCA ACGAGGCCCC GGACGTCCTG GAGTACAACA AGGGCAACGC CAGCACCGGC
CTGCTCGCCA AGCAGGGCCT GCTGGTCGAC CTGACCGACG AGGTCAAGGC CAAGGGCTGG
GACGCCAAGG TCGGCGCCGT CGACACCGCC GCCCGCTACG ACGAGTCCGG CGTCATGGGT
GGCGACAAGT GGTACGGCGT GCCCAACTAC GCCGAGTACG TCCTCGTCTA CTACAACAAG
GACATGTTCG ACCAGCAGGG CCTGCAACCG CCGACCACGC TGGACCAGCT CACCGCCGCC
ATGGACAAGT TCAAGTCCGC GGGCATCACC CCGCTGGCCA CCGGCGGCGG CGAGTACCCG
GCGCACCAGG TGCTCTACCA GCTCGCCCTC ACCGAGGCCG ACCGCGACTG GGTCGACCGC
TACCAGCGCT ACACCGGCGA CGTGGACTTC CACGACGAGG CGTGGACCAA GGGCGCCACC
ACCTTCGCCG ACTGGGTCGC CAAGGGCTAC GTCGACAAGG ACGACGCGGG CCTGAAGGCC
GAGGACATGG GCCTGTCGTT CATGCAGGGC AAGCAGCCCG TCATGATCAC CGGCAGCTGG
TGGTTCGGCC GCGTCAAGGC CACCATCAAG GACTTCCAGT GGGGCACCAC CGCGTGGCCC
GGCAAGATGA CCTCCGGCGG CAGCGGCAAC CTGTGGGTGG TGCCCAAGGG CTCCGAGAAG
CAGGACATCG CCAAGGAGTT CATCGACATC ACGCTCTCCC AGGAGATCCA GGACGTCCTG
CGCGACTCCG GCGGCGTCGC GCTCGCCGCG AGCGACGGGC AGGCCGCGGA CCCGCAGACC
CAGCGCCTCA ACGAGGACTT CGCCGCGGTG GCGGCGGCGG ACGGGTTCGG CTTCTACCCC
GACTGGCCCG CCCCCGGCTT CTACGACGTG CACGTCTCCG CCGTGCAGAA GCTCATGACC
GGCGGCGCCA CCCCGGACCA GGCCCTCGAC GAGCTGGTCG GCCCGTACCG GGAGAACCTC
GCGGACATCG GCAAATGA
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| Protein sequence | MTSKRLTAVV LAASLAAAGC GGSAGDDDKT FRIWHYESPD SAMAIAWNKA VDQLKQRHPD
LNVVVEEKGF EQIRKTASMV LGSNEAPDVL EYNKGNASTG LLAKQGLLVD LTDEVKAKGW
DAKVGAVDTA ARYDESGVMG GDKWYGVPNY AEYVLVYYNK DMFDQQGLQP PTTLDQLTAA
MDKFKSAGIT PLATGGGEYP AHQVLYQLAL TEADRDWVDR YQRYTGDVDF HDEAWTKGAT
TFADWVAKGY VDKDDAGLKA EDMGLSFMQG KQPVMITGSW WFGRVKATIK DFQWGTTAWP
GKMTSGGSGN LWVVPKGSEK QDIAKEFIDI TLSQEIQDVL RDSGGVALAA SDGQAADPQT
QRLNEDFAAV AAADGFGFYP DWPAPGFYDV HVSAVQKLMT GGATPDQALD ELVGPYRENL
ADIGK
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