Gene Amir_2973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2973 
Symbol 
ID8327162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3439060 
End bp3440160 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content76% 
IMG OID644943498 
Productoxidoreductase domain protein 
Protein accessionYP_003100739 
Protein GI256377079 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCACCG GACCCGTCGG CGTCGGCGTC ATCGGCGCGG GCACCATCAG CGACACCTAC 
CTGGAGAACC TGACCGCGTT CGCCGACACC CGCGTCGTCG CGGTCGCCGA CCTCGACCCC
GAGCGCGCCG CCGCCCAGGC AGCCAAGCAC GGCGTCGAGC GCTCCGGCAC CGTCGAGCAG
CTGCTCGCCG ACGGCGAGGT GGAGCTGGTC GTCAACCTGA CCATCCCCGC CGCGCACGTC
CCCGTCGGCA TGGCCGCGCT GGACGCGGGC AAGCACGTCT GGTCCGAGAA GCCCCTGGGC
CTGGACCGGG GCAGCGTCGA GCTGCTGCTG GCCAAGGCGC GCGACGCCGG GCTGCGGGTG
GCCTGCGCGC CCGACACCGT CCTCGGCCCC GGCCTGCAGA CCGCGCGCCG CGCCATCGAC
GCCGGTCGCA TCGGCCAGCC GCGCTCCGCG CTCGCCCTGT TCCAGACGCC GGGCCCGGAG
AGCTGGCACC CGGCGCCGGA GTTCCTGTTC CAGACCGGCG GCGGCCCGCT GCTGGACATG
GGGCCGTACT ACCTGACCTC GCTGGCCACC GTGTTCGGCC CGATCGACCA CGTCACGGCG
GCGGGCGGCC GGGCGCGCGA GACCCGCGTG ATCGGCTCCG GCCCGAGGGC GGGCACCGAG
TTCGAGGTGA CCGTCCCGAC GTCGGTGTCC GCGCTCGTGT CCTTCGAGGG CGGCGGCAGC
GCGCAGCTCG TGCTCAGCTT CGACTCCGCG CTCGTGCGCA CCGGGTTCGT CGAGGTCAGC
GGCACGGCGG GCACCCTGGT GCTGCCCGAC CCGAACCGGT TCGACGGCGT CACCGCGCTG
CACGCGCCGG GCGCGGAGAA GGAGGACCTG GAACCGGTCG GCGCGCTGGC CGGGCGCGGC
ACCGGGGCGC TGGAGCTGGC GCGGGCCATC CGCGCGGGCG TGCCGGAGCG GGCGTCCGGC
GAGCTGGCCG CGCACGTGCT GGACGCGATG CTCGCGATCG CCGAGTCGGT CGAGTCCGGC
CGCACCGTGG AGGTCGCCAG CACGTTCGCC GTGCCGCCCA CCCTCCCCGA GGACTGGGAC
CCGTTCGCGG CGACCCTCTG A
 
Protein sequence
MSTGPVGVGV IGAGTISDTY LENLTAFADT RVVAVADLDP ERAAAQAAKH GVERSGTVEQ 
LLADGEVELV VNLTIPAAHV PVGMAALDAG KHVWSEKPLG LDRGSVELLL AKARDAGLRV
ACAPDTVLGP GLQTARRAID AGRIGQPRSA LALFQTPGPE SWHPAPEFLF QTGGGPLLDM
GPYYLTSLAT VFGPIDHVTA AGGRARETRV IGSGPRAGTE FEVTVPTSVS ALVSFEGGGS
AQLVLSFDSA LVRTGFVEVS GTAGTLVLPD PNRFDGVTAL HAPGAEKEDL EPVGALAGRG
TGALELARAI RAGVPERASG ELAAHVLDAM LAIAESVESG RTVEVASTFA VPPTLPEDWD
PFAATL