| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2954 |
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| Symbol | |
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| ID | 8327143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 3409582 |
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| End bp | 3413022 |
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| Gene Length | 3441 bp |
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| Protein Length | 1146 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 644943480 |
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| Product | transcriptional regulator, putative ATPase, winged helix family |
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| Protein accession | YP_003100721 |
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| Protein GI | 256377061 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00262132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGGTG GGGCGGCGGG GTTGCGGGTC GCGCTGCTCG GGCCGGTGCG CGCCTGGGTC
GGCGAGCGGG AGGTCGAGCT CGGGTCGTCG CGGCAGCGCG GGGTGTTCAC CGTGCTCGCC
CTGCGCGCGG GCACGGCCGT GCGGCGGGAC GAGCTGATCC GGGGCGTGTG GGGCGACGAC
GCGCCCGCCA CGGCGGGCGG CAGCGTGCAC ACCTACGTGT CCGTGCTGCG CAAGGCCCTC
GAACCCGACC GGCCGCGCGG GACGCCGCCC CGGCTGCTGG AGTCCTCCGG CTCCGGCTAC
CGGCTGCGCC TGGAGGCGGC CGACTCGGAC GTGGCCGCGT TCGCCGCGCT GCGCGAGCGC
GCCCGCGAGC AGCTCGCCGC CGAGGAGCAC CGGGCCGCGC TGCGCACGCT CGACGAGGCG
CTGGCGCTGT GGCGCGGCAC CGCCCTGTCC GGGTTGGACG GCCCGTTCGC CCGCGCCCGG
CGCGCCTCCC TCGGCGAGGC CCGCTCCGCC GCGCGCGAGG CGCGGGCCGA GGCGGCGCTG
GCGCTGGGCG AGCACGGCGA CGTCATCGGC GAGCTGGGCG CGCTGGTCGC CGAGGAGCCG
CTGCGCGAGC GCGCCCGCGA GCTGCTCGCC CTCGCGCTGC ACCGGGCCGG GCGCAGCGCC
GAGGCGCTGG AGGTGCTGCG GGAGGCCAGG CGGGTGCTGC GCGACGAGCT GGGCGTCGAC
CCCGGACCCG GCCTGCGCGC CGCCCGCGAC CTGGTGCTGC GCGACCACCG CGCGGGCCCC
GGCCAGGATC CGCCGCAGGC CGCCGCCATC CCCCGGCCGA GGCGCGGTGA GGCCGACCAG
GTCCTCGTCG GCCGGGACGA GGAGCTGCGG GTGGCTCGGG AGCTGATCGG CGCCACGTCC
TCGGGCCGGG GGCGGGTGCT GTGGGTGGAG GGCGAGATGG GCATCGGCAA GTCCAGCCTG
CTCGCGGCGG TGACCGCGCT CGCCTCGGCC GCCGGTCACC GCGTCGCGCA CGGCGTCGCC
GACGAGCTGG GCACCCGGTT CCCGCTGCGG CTGGCCATGG ACTGCCTGGA CGTGGACGTG
CGCTCCCCCG ACCCGCGCCG CGCCGCGACC GCCCGCGCCC TGCGCGACGA GCGCCCGCCG
TCCGGGTCGG TGTTCACCGC CGGTGACCCG ATCGCGGCGG CCGTGGAGCG GCTGGGCGCG
CTCGTGGAGC GGCTGTGCGG GGACGGGCCG CTGACCGTGG TCATGGACGA CCTGCAGTGG
GCCGACGAGA GCAGCACCGA GCTGTGGCAC CGGCTCACCG GCGTCGCCCG CAGGCAGCCG
CTGCTGCTGG TCGGGGCGGC CAGGCCGGTG CCGCACCGGG TCGACGTGGC CCGGTTGCGC
CGCGACGCCG AGGCGGGCGG GGCGGCGCTG GACCTGCTGC CGCTGACCGA CTCGGCCGTC
ACCAGCGTGG TCGGCCAGCT GGTCGGGGCC GCGCCGGGGC CGGGGCTGCG GCGGGTCGCG
GCGCGCGCGG GCGGCAACCC GCTGTACGTG CGGGAGGTCG CCGACGCGCT GGTGCGCGAG
CGCGCGGTGC TGGTGTCGGC CGGGATCGCC GAGGTCGCCC CGGACGTGCT GGACCGCACC
CCGGTGTCGC TGGTGTCGGC GGTGGCCGAC CGGCTGGACT TCCTGACCGA CCCGACCAGG
CAGGTGCTGC GCTGGGCCGC GCTGCTCGGC GGCGAGTTCT CCGTGGAGGA CCTGTCGGTG
GTGCTGGCCA GGCCGGTGCC GGACCTGCTG GGCGCGTTCA CCGAGGCGCT CGCGGCCGGG
GTGCTGCGCG ACGCCGGGTC GCGGATGGCG TTCCGGCACC CGGTGATCCG GCAGGCCCTG
TACGAGGGCA CCCCGTCCGC GCTGCGCACC GCCCTGCACC AGCAGGCGGC GCGGGCGCTC
GCCGAGTCCG GGGCGCCCGC CGAGCACGTG GCCGGGCAGC TGATGGCGGC GGCGGGCGAG
GTGGACGCGT GGGCGGTGCG CTGGGTGGTC GGCAACGCGC AGCCGCTCGG GGACCGGGCG
CCGCTGGTCG CGGTGGAGCT GCTGCAGCGG TGCCTGGCCT CGCCGCGCGC CCCGCAGGAC
ACCCGGTCGG CGCTGGCCGC GCGGCTGAGC TCGGTGCTGT TCCGGGTGGG CCGGGACGCC
GAGGCCGAGG AGCACGCCCG GCGCGCCCTT CCCGGTCTGC GCGACGCCGA CCAGGTCGCC
AAGGCCCGCT GGACGCTGGC GTACGTGCCC TACCGGGCGT CCCGGCCGCG CGCCGCGCTG
GCGGAGCTGC GGGAGGCGCT GGCCGACCCG GTGCTCACCG ACACCTGGCG GGCGCGGCTG
CTGTCGCTGC TGTCGCTGGT GCAGCGGGCC GGGGTCGGGG ACCTGGACCA GGCGGCGGTG
AGCGCGCGGC AGGCCATCGC GGTGGGCGAG CGGGCGGGCG ACCCGTTCGC GATCGGGCAG
GCGCTGGAGG TGCTGTGGCA GGTGGAGGCG GTGCGGCGGG ACTACGCGCG GGCCGTCGGC
TACCTGGACC AGGCGCTGGA CGTGGTCGGC ACGGACGTGG GGCTGGCCGA CCTGCGGCTG
GTGCTGCTGG ACAACCGGGT GTTCACGCTC CAGTGCCTCG ACCGGCTGGA CGAGGCCGGT
CAGGTGCTGG AGCAGGCGTT CCGGGTGGCC GGTCCGGGCA CGCCGGTGGC CGGGCTGCAG
GTGGCGGCGG CGGTGCACGG GTTCTGGCTG GGCGACTGGG GCGGGGCGGT GGCGCGGCTC
GGGGCGGTCA TGGCGGACGC GGAGGAGTTC ACCGGGTTCG GGCTGCGCGA GGGCGGGCCG
GTGCTGCTGC TGCACGGGGT GGCCGCGCTG ATCGCCGCGC ACCGGGACGA CGGGGCGGCG
CTGGCCGCGC ACCTGGCGGC CGGGGCGAAC CTGCCGCTGG TCACGGCGGC GGACCGGGAG
AACTGCGACT TCCTGGTGGC GGCCGAGGCG ATGGGGGCGG CGCGCGGCGG CGACGAGGCG
GGGGCGGTGC AGCTGCTCGG GGCGATCCTG GACACCCGGT TCGCGCAGAT GATGCTGCGG
CACCAGTGGT TGCCGGACCT GGTGCGGCTG GCGCTGGCCT GCGGGGACCG GGCCACGGCG
CGCGAGGCCG TCGAGGCGTG CGAGGCGGAG GCGGCGCGGG AGACCACGAC GGCGCGGGCG
GCGGCTGCGG CGCGGCGGTG CCGGTGCGTG CTGGAGGGCG ACGCGGACGG GCTGGCCGAG
GTCGCCGGGC ACTACCGGCG GGCCGGGCGG GTGTTCGAGC TGGGGCAGAC CCTGGAGGAC
CGGGCGGTGC TGCTGGCCGG GCGGTCCGGG GCGGGCGCGG CCGAGCGGGA GGCGGCGCTG
GGCGAGGCGC TGGAGGTGTA CGAGGGGCTG GGCGCGCGGT GGGACGTGCG GCGGCTGCTG
GAGCGGGCGG GCGGGGACTG A
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| Protein sequence | MSGGAAGLRV ALLGPVRAWV GEREVELGSS RQRGVFTVLA LRAGTAVRRD ELIRGVWGDD
APATAGGSVH TYVSVLRKAL EPDRPRGTPP RLLESSGSGY RLRLEAADSD VAAFAALRER
AREQLAAEEH RAALRTLDEA LALWRGTALS GLDGPFARAR RASLGEARSA AREARAEAAL
ALGEHGDVIG ELGALVAEEP LRERARELLA LALHRAGRSA EALEVLREAR RVLRDELGVD
PGPGLRAARD LVLRDHRAGP GQDPPQAAAI PRPRRGEADQ VLVGRDEELR VARELIGATS
SGRGRVLWVE GEMGIGKSSL LAAVTALASA AGHRVAHGVA DELGTRFPLR LAMDCLDVDV
RSPDPRRAAT ARALRDERPP SGSVFTAGDP IAAAVERLGA LVERLCGDGP LTVVMDDLQW
ADESSTELWH RLTGVARRQP LLLVGAARPV PHRVDVARLR RDAEAGGAAL DLLPLTDSAV
TSVVGQLVGA APGPGLRRVA ARAGGNPLYV REVADALVRE RAVLVSAGIA EVAPDVLDRT
PVSLVSAVAD RLDFLTDPTR QVLRWAALLG GEFSVEDLSV VLARPVPDLL GAFTEALAAG
VLRDAGSRMA FRHPVIRQAL YEGTPSALRT ALHQQAARAL AESGAPAEHV AGQLMAAAGE
VDAWAVRWVV GNAQPLGDRA PLVAVELLQR CLASPRAPQD TRSALAARLS SVLFRVGRDA
EAEEHARRAL PGLRDADQVA KARWTLAYVP YRASRPRAAL AELREALADP VLTDTWRARL
LSLLSLVQRA GVGDLDQAAV SARQAIAVGE RAGDPFAIGQ ALEVLWQVEA VRRDYARAVG
YLDQALDVVG TDVGLADLRL VLLDNRVFTL QCLDRLDEAG QVLEQAFRVA GPGTPVAGLQ
VAAAVHGFWL GDWGGAVARL GAVMADAEEF TGFGLREGGP VLLLHGVAAL IAAHRDDGAA
LAAHLAAGAN LPLVTAADRE NCDFLVAAEA MGAARGGDEA GAVQLLGAIL DTRFAQMMLR
HQWLPDLVRL ALACGDRATA REAVEACEAE AARETTTARA AAAARRCRCV LEGDADGLAE
VAGHYRRAGR VFELGQTLED RAVLLAGRSG AGAAEREAAL GEALEVYEGL GARWDVRRLL
ERAGGD
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