| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2936 |
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| Symbol | |
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| ID | 8327125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 3390127 |
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| End bp | 3393291 |
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| Gene Length | 3165 bp |
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| Protein Length | 1054 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 644943462 |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003100703 |
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| Protein GI | 256377043 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.281225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGGCTCC AGGTGCTGGG TTCGTCGCGG GCGTGGCACG GCGGCACGGA GATCGACCTC
GGCCCTCCCG GCAGGCGGGC CGTGCTGGGG CTGCTCGCGC TCGCCCGCGG CGAGGCCGTC
ACCCAGGCCG AGCTGGTCCG GTCGCTGTGG GGCGTGTCTC CCCCGCGCAG CGCGGTGAAC
GTCGTGCAGA CCCACGTCAA GCACCTGCGC AGGCTCCTGG AACCCACGAG GCCGCACCGG
ACGCCCAGCA CCGTGCTGCC CTACTCGGGC GGCGGTTACG CGCTCGCCCC GGACGCCGTC
GAGGTGGACC TGGCGCGGTT CCGCCACCTG GTCGCCGAGG CGGGGAGGGC GCGCCGCGCG
GGCGAGGTCG GGCGGGTCGC GGAGCTGCTC GGCGAGGCGC TGCGGCTGTG GCAGGGGCCG
CCGCTCGCGG ACGTGCCGTT CCTCGCCGCG CACCCGTGGG TCGTCGCGCT CGTCGCCAAG
CGGGCCGAGG TCGCCGCGGC CCACGGCGAC GCGATGATCA GCACCGGCGC GGCGGCCGAC
GTGCTGCCCG ACCTGGTGCT CGCCGCCGGG CGCCACCCGC TGGACGAGGC CGCGCAGGCG
CGCCTGATCC GCGCCCACCA CGCCGTCGGC CAGCGGGCTC GGGCGTTCCG GGTCTACCAC
GAGACGCGCG ACCGGCTCGC CGACGAGCTG GGCGTCGACC CCGGCCCCGA GCTGCGCGAG
GCGCACACGG CGCTGCTGCG CGAGGGCGGC GCGGGTTCGG CGGCGGCGCT GCGGGTGCCC
AGGCAGCTGC CCGTCGACCC GGTCGGCTTC ACCGGCCGCG CCGCCGAACT GGCCGTGCTG
GACGGGATCG CGCGGCCGGG GGCGATCGCC GCCGTGTCCG GCGCGGCGGG CGTGGGCAAG
ACGGCGCTGG CCGTGCACTG GGCGCACCGC GCCCGCGACC GCTTCCCGCA CGGCCAGCTG
TACGCGGACC TGCGCGGGCA CACCCCCGGC CCCGCCGCCG AGCCGATCGA GGTGCTGGCG
CAGTTCCTGT CGGCGCTGGG CGTTCCGCCG CAGCGCGTCC CGGTCGACCT GGGGACCGCC
TCCGCCATGT ACCGGACGCT GCTGACCGAC CGGAAGATGC TGGTGCTGCT GGACAACGGC
GCCGGTCCCG AGCAGGTCCG GCCGCTGCTG CCCGCCGGGC GCGACTGCCT GGTGCTGGTC
ACCGGACGGG AGCGGATGAC CGGGCTGGTG GCCACGCACG GCGCGCGCGG CCTGGCGCTG
GACGTGCTGG GCGCGGGCGA GGCGCTGGCG CTGCTGGAGT CCGTGCTGGG CCCCGATCCC
ACCGATCCCA CCGACCGCGC CGCCACCGAC CGCGACCCCG CCGACCTGGA CCCCGCCGAC
CTGGACCGGG ACGGGCTGCC CGCGCTGGCG CGGCTATGCG CGGGCCTGCC GCTGGCGCTG
CGGATCGCCG CGGCCAACAT CGCCGACGGC GCGGACCGGG ACGTGGCCGG GCACGTCGCC
CGGCTGCGGG AGGGCAACCC CCTGGCCGCG CTGTCGGTGC GGGGCGACGA GCAGGCCGCG
GTGCGCACCG CGTTCGACCT GTCGCTGGCG GCGCTGCCCA CCGAGGCCCG AGGGCTGTTC
CGGCTGCTGG GCCTGCTGCC CGGCGCGGAC TTCGGCACCG AGTCGGTCGC CGCGCTCGCG
GGCGTCCCGG TCGACCGGGC GGCGGCGCTG CTCGACCGGC TGGCGGACGC GAGCCTGGTC
GAGCGGCACT CCCAGGGCCG CCACCGCTTC CACGACCTGC TGCGCCACTT CGCCGCCGAA
CTCGCCGAAG GACAGCAGCG GGACGCCGAC GACCTCGACG CGGCGCGGGC CAGGCTGCAC
GACTGGTTCC TGCGCGCGGT CGACCGCGCC GCCCGGCTGC TGTACCCGCA CATGCTGCGG
CTGCCCGTGC CGGTCGACCC CGCCGCGCCC CCGGCGGGCC CGGCCGACCT GTCCTCGGCG
ACCGGCTGGC TGGACGCCGA GCGCGGCACC CTCGTCGCGC TCGCGCGCGA GACCGCCCGG
TCGGGCCCGC GCCCGGTGGC GTGGCTGCTG TCGGACTCGC TGCGCGGCTA CTTCTGGATG
TCGATGCGCC GCGTCGACTG GCTGGCGACG GCCGAGGCGG GGCTGGCCGC CGCCGAGGCG
GAGGGCGGGT GGCGGGCCCG CGCCTCGGCC AGGCTCAGCA TGGCCGACCT GCACTTCCGC
CAGGGCCGCT ACCGCCAGGC GGTCCGGCAC CACGCGCACG CGCTGCTGCT GGCCAGGAAC
GCGGGCTGGG TGGAGGCGCA GGCCGCGGTG CTCGGCAACC TCGGGTGCGT GTACTGGCAG
TCGGGCAGGC TCGCCCCCGC GGCGGCCAGG TTCGAGCGGG CGCTGCTGCT GAGCACGGCC
ATCGGCCAGA CCTCGGGCGA GGCGGTGGCG CTGGGCAACC TGGGCCTGGT GCACTGGGAG
ATGGGCGCGC TGGAGCGGGC GGCCGAGCAC TACGGGCGGG CGCTGGAGCG GTACCGGGCG
GTCGGGTCGC GCTACGGCGA GGCGATCAAC CTGTGCAACC TCGGCGAGGT CACGCGCGCG
CTCGGCAGGC CGGAGGAGGC CGAGGGGGTG CTGCGGCGCG CGCTGGCGCT GCACCGGGAG
ACCGGGGACC GCAGCGGCGA GGCCGAGTCG CGCAGCAGGC TCGCCGGGGC GCTGTCCGAC
CTGGGGCGCG CCGCCGAGGC CGCCGAGCAC GCCCGTGAGG GGCTGGTGCT GGCGCAGGAG
GCCGGTGACC CGCGCACCGA GGCCGAGTCG CTGGCCGCGC TCGCCGCGCT GCACCACCGG
CGCGGGCGCC CGCGCGAGGC GGCCGACCAC TACCGGCAGG CGCTGGTGCT GATCGGGGAG
AGCGGCGACC GGTACCCGGA GGTCGACGTG CTCGTCGGGC TGGCCTCGGC GACCGGGGAC
GCGGCCCCGG CGAGCAGGGC GCTCGCGCTC GCCGAGGAGT GCGGGTTCCA CGCGCTGCGC
GGGCTGGCGC TGTCGGTGCT CGCGCACCTG GCCCTTGCCT CGGGCGAGCG CGGCAGCGCG
CTGCGGCACG CCGAGCGGGC GCTGGCCGTG CAGCGCGGGA CCGGGGACCG CAGGGGCGTG
GCCCGCGCGC TCGCCGTGGT GCGACGGGCG CGCTCGCCGG TGTGA
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| Protein sequence | MRLQVLGSSR AWHGGTEIDL GPPGRRAVLG LLALARGEAV TQAELVRSLW GVSPPRSAVN
VVQTHVKHLR RLLEPTRPHR TPSTVLPYSG GGYALAPDAV EVDLARFRHL VAEAGRARRA
GEVGRVAELL GEALRLWQGP PLADVPFLAA HPWVVALVAK RAEVAAAHGD AMISTGAAAD
VLPDLVLAAG RHPLDEAAQA RLIRAHHAVG QRARAFRVYH ETRDRLADEL GVDPGPELRE
AHTALLREGG AGSAAALRVP RQLPVDPVGF TGRAAELAVL DGIARPGAIA AVSGAAGVGK
TALAVHWAHR ARDRFPHGQL YADLRGHTPG PAAEPIEVLA QFLSALGVPP QRVPVDLGTA
SAMYRTLLTD RKMLVLLDNG AGPEQVRPLL PAGRDCLVLV TGRERMTGLV ATHGARGLAL
DVLGAGEALA LLESVLGPDP TDPTDRAATD RDPADLDPAD LDRDGLPALA RLCAGLPLAL
RIAAANIADG ADRDVAGHVA RLREGNPLAA LSVRGDEQAA VRTAFDLSLA ALPTEARGLF
RLLGLLPGAD FGTESVAALA GVPVDRAAAL LDRLADASLV ERHSQGRHRF HDLLRHFAAE
LAEGQQRDAD DLDAARARLH DWFLRAVDRA ARLLYPHMLR LPVPVDPAAP PAGPADLSSA
TGWLDAERGT LVALARETAR SGPRPVAWLL SDSLRGYFWM SMRRVDWLAT AEAGLAAAEA
EGGWRARASA RLSMADLHFR QGRYRQAVRH HAHALLLARN AGWVEAQAAV LGNLGCVYWQ
SGRLAPAAAR FERALLLSTA IGQTSGEAVA LGNLGLVHWE MGALERAAEH YGRALERYRA
VGSRYGEAIN LCNLGEVTRA LGRPEEAEGV LRRALALHRE TGDRSGEAES RSRLAGALSD
LGRAAEAAEH AREGLVLAQE AGDPRTEAES LAALAALHHR RGRPREAADH YRQALVLIGE
SGDRYPEVDV LVGLASATGD AAPASRALAL AEECGFHALR GLALSVLAHL ALASGERGSA
LRHAERALAV QRGTGDRRGV ARALAVVRRA RSPV
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