Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2925 |
Symbol | |
ID | 8327114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 3376705 |
End bp | 3378711 |
Gene Length | 2007 bp |
Protein Length | 668 aa |
Translation table | 11 |
GC content | 80% |
IMG OID | 644943451 |
Product | transcriptional regulator, SARP family |
Protein accession | YP_003100692 |
Protein GI | 256377032 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGGTC GGGGACTTCG GGTGGAGCTG CTGGGACCGC TGCGCGCCTG GACGGACCCC GGCGAGCGGT CCGAGGTCGC GCTGGGACCG GCCCGCAGGC GCGCGGTGTT CGCCGTGCTG GCGGCCCGCG CGAACCAGGA GGTGACCAGG CAGGACCTGG TGGACGCGGT GTGGGGCGAC GAGCCCCCGC CGACAGCGGT GGGCGCGCTG CACACCTACG TCTCCGGCCT GCGCGCGGCG CTGGGCCAGG ACCGGGCGGC GCTGGCGTCC GGCCGCGCCT CGTACTCCCT GCGCGTGCCC GACGACGGCG TGGACGCGGC GGGGTTCGAG CGCTCCCGCC TGATCGGGAC GCGGCTGCTG GGCGCGGGCG ACTGGTCGGG GGCACGCACC GCGCTGACCG GGGCGCTCGC GCTGTGGCGC GGCCCGGCGC TCTCCGGCGT CCCCGGCCCG TTCGCCGAGG TGGAGCGCCG CAGGCTGGCC GAGCTGCGCC TGGGCGCCCT GGAGGCGCAC GCCCGCGCCG GTCTGGAGCT GGGCGAGCAC ACCGAGGTCC TGGCGTCCCT GTCCGCGCTG GTCGCCGAGC ACCCCGGTCA CGAGTCGCTG CGGGAGCTGG TGATGCTGGC CCTGCTGCGC TCGGGCCGCC GGGCCGAGGC GCTGGAGTCC TACCGGGACG CCCGCCGGGC GCTCGCCGCG CAGGGCGTGG AGCCGGGTCC GGCGCTGCGC GCGCTGCACC AGCGCATCCT GCACGAGGAC CCCGGCGCCG CGGCGGTGGC GGAGGTGCTG GCGGCGGGAC CGGTGCGCGC GGACCGGATC ACCCGCGTGC GGGACCTGGT CGCGGGCCCG GCGGGCTGGG ACCGGGCGTT CTCCGAGCAG CACCCGACCG TGGTCCGCGC CCCGGCCGCG CGCCGGACGC CCGATCACCC CACCCCTGCC CGGTCGTCCA CCCCCGCGCC GCCCCGCCCG ACCGCGCGCC CGCAGCCCGC ACGCCCGCGG CCCGCCAGCC ACTTCCTGGG CCGCACCGAG GAGCTGGCCC TCCTGCACGA GCTGATCACC GACGTGCGGG CCGGTCGCGG CGGTCTGCTG TGGCTGGAGG GCGACGCGGG CGTCGGCAAG TCCGCCCTGC TCGCCGAGGC GCTGTCGACC GCGCCGGGCT GCCGCGTGGT CCCGGTGTCC GGCGCGCGGG GCCTGTTCGG CGACCTCGCC ACCGCCCCGC TGGTCGCGGC GGCCCTCACC GGCTCCACCA GCCCGGAGCC GCTCGTGCTG CTGGTGGACG ACCTGCACGC GCTGTCCGAG CCCGACCTGC TGATGTGGCA CCGCCTGGCC ACCACCGCCC TCGCGCCCCG AGGCGCCCCG CTGCTGCTGC TCGCCGCGTC CCGCCCGCTC GCGACCGGCC GCGTCCTGCC CCGGTTGCGC CGGGCGGTGC GGGTCAGGGG CGGCCACCTG CTGACCCTGC CGCCGCTGCC GACCGCCTAC GTCGCGGCGC TGGTCGGCCA CGTCGTGGGC GCCCGCCCCG GCGCGTCCCT GCTCGACCTG GCCAGGCGGG CGGGCGGGAA CCCCCTGTTC GCCGAGCGGG TGGCGGCCTC GCTGGTGCGG CGCGACGCCG TGCGCGTGGT GGACGGCGTG GCCGAGGTGG ACGAGGTCGA GCTGGAGCGG GTGCCCACCT CGCTGCTGTC GGTGGCCGCG GGCGTCCTGG AGCCGCTGTC GGCGGCGGCC CGGGAGGTGC TGCGCTGCGC GGCCGTGCTC GGCCCGCGCT TCCGGGTGGC CGAGCTGGGC GCGGTGACCG GCCGGACGGT GCGCGAGCTG CTGGGCGCGC TGGACGAGGC GGTGGCCGCG TCGGTCGTCG TGGACCCCGG TTCCGGCGAG GAGCTGGCGT TCCGCAACGC CTGCCTGCAC CGCGCCCTGC TGGACGGCCT GCCCACGACC GCGCTCAGCG CGCTGCGCCG ACGAGCCGCG CGGGCGCTGA GCACCCTGGG CGCGCCGCCG GAGCGGATCG CGGCGGTCAG CGGCTGA
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Protein sequence | MSGRGLRVEL LGPLRAWTDP GERSEVALGP ARRRAVFAVL AARANQEVTR QDLVDAVWGD EPPPTAVGAL HTYVSGLRAA LGQDRAALAS GRASYSLRVP DDGVDAAGFE RSRLIGTRLL GAGDWSGART ALTGALALWR GPALSGVPGP FAEVERRRLA ELRLGALEAH ARAGLELGEH TEVLASLSAL VAEHPGHESL RELVMLALLR SGRRAEALES YRDARRALAA QGVEPGPALR ALHQRILHED PGAAAVAEVL AAGPVRADRI TRVRDLVAGP AGWDRAFSEQ HPTVVRAPAA RRTPDHPTPA RSSTPAPPRP TARPQPARPR PASHFLGRTE ELALLHELIT DVRAGRGGLL WLEGDAGVGK SALLAEALST APGCRVVPVS GARGLFGDLA TAPLVAAALT GSTSPEPLVL LVDDLHALSE PDLLMWHRLA TTALAPRGAP LLLLAASRPL ATGRVLPRLR RAVRVRGGHL LTLPPLPTAY VAALVGHVVG ARPGASLLDL ARRAGGNPLF AERVAASLVR RDAVRVVDGV AEVDEVELER VPTSLLSVAA GVLEPLSAAA REVLRCAAVL GPRFRVAELG AVTGRTVREL LGALDEAVAA SVVVDPGSGE ELAFRNACLH RALLDGLPTT ALSALRRRAA RALSTLGAPP ERIAAVSG
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