| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2920 |
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| Symbol | |
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| ID | 8327109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 3369915 |
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| End bp | 3371189 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644943446 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003100687 |
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| Protein GI | 256377027 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCCGA ACCGCCGCGC CGGGTCGCGG GCACGACGCT GGGCAGGTCT GGCCGCCGCC
CTCTCCCTGG CGGTCACCGG CTGCGGCCCC GGCGCCGCCG CCGACCCGAA CACGCTCACC
GTGTCGGTGT GGAACCTGGC CAGCACCCCG GAGTTCCAGG CCCTGTTCGA CGCCTTCGAG
CAGGCCAACC CCGGTGTCAC GGTCAAGCCG GTGGACATCG TCGCCGCCGA CTACCCGGAG
AAGGTCACCA CCATGCTCGC GGGTGGCGAC CGCACCGACG TGATCACCAT GAAGAACGTC
ACCGACTACG CCCGCCACTC CAGCCGGGGC CAGCTCCAGG ACGTCACCGA CCTCGTGGAG
CCGCTCGAGC CCCAGGGCCT GCAAGGACTT GAGGCGTTCG AGTCCGAGGG CAGGTACTTC
GCCGCCCCGT ACCGCCAGGA CTTCTGGGTG CTGTACTACA ACAAGACCCT GTTCCAGCAG
GCAGGCGTCC CCGCTCCCGA GAACTGGACC TGGGCCGAGT ACGCCGACGC GGCGAAGAAG
CTCACCACCG GCAGCGGCGG CGACAAGACC TTCGGCGCCT ACCACCACGT GTGGCGCTCG
GTGGTCCAGG CCATCGCCGC GGCCCAGAAC GACGGCGACC AGCTCAGTGG CGACTACGGC
TTCTTCACCG AGCAGTACAC CACCGCGCTG CGGATGCAGC AGGACGGCTC GGTCCTGGAC
TACGGCGCCA TCACCACCCA GCAGGCCGAC TACCGCAGCA CGTTCGAGCG GGCCAGGACC
GCCATGATGC CCATGGGCAC CTGGTACACC TCCAGCATCA TCAAGGCCAA GCGGGAGGGC
GACTCCCAGG TCGACTGGGC CATCGCCCCG CTCCCCCAGC GCGCCGAGGG CGGCGAGGTC
GCCACCTTCG GCTCCCCCAC CGCGTTCGCC GCCAACCGCA ACGCCGACAA CAGCGACCTG
GCCCGCGAGT TCGTCGCCTT CGCCGCGGGA GAAGAAGGCG CCAAGGCCAT CACGAAGGTC
GGCGTCGTGC CCGCCCTGCG CAGCGAGGCG CTGACCGACG CCTACTTCCA GCTCGACGGC
ATGGCGAAGG ACGAGCTGTC CACCGCCGCG TTCCGCCCGG ACCACGTCGC CCTCGAGATG
CCGGTGAGCA AGCGCAGCTC CGCCGTCGAC ACCATCCTCA AGGAGGAGCA CGAGCTGATC
ATGGTCGGCG AGAAGTCCGT CGCCGACGGC ATCCGCGACA TGGGCGAGCG CGTGCGCACC
GAGGCCCCCG AGTAG
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| Protein sequence | MIPNRRAGSR ARRWAGLAAA LSLAVTGCGP GAAADPNTLT VSVWNLASTP EFQALFDAFE
QANPGVTVKP VDIVAADYPE KVTTMLAGGD RTDVITMKNV TDYARHSSRG QLQDVTDLVE
PLEPQGLQGL EAFESEGRYF AAPYRQDFWV LYYNKTLFQQ AGVPAPENWT WAEYADAAKK
LTTGSGGDKT FGAYHHVWRS VVQAIAAAQN DGDQLSGDYG FFTEQYTTAL RMQQDGSVLD
YGAITTQQAD YRSTFERART AMMPMGTWYT SSIIKAKREG DSQVDWAIAP LPQRAEGGEV
ATFGSPTAFA ANRNADNSDL AREFVAFAAG EEGAKAITKV GVVPALRSEA LTDAYFQLDG
MAKDELSTAA FRPDHVALEM PVSKRSSAVD TILKEEHELI MVGEKSVADG IRDMGERVRT
EAPE
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