Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2834 |
Symbol | |
ID | 8327023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 3262787 |
End bp | 3263614 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644943368 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003100609 |
Protein GI | 256376949 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCGAAGA CCCTCGTGGT GGACGAGACC GAGCGCGGAC CGCTCGGGAT GCACTGGCTG ACCTGCGCGG CGCTGGCCGT GCTGTTCCTG TTCCCCCTGG TGTGGGCCGC TTTCGCGTCG GTGCGCACGG ACACCGGGTT CGGCCTGGAG AACTACGCCA GGCTGTTCTC CTCCGAGGAC GGCGTGCGAC CGCGGCACGT GCTCAACAGC GCCGTCGTCA GCGCGCTCAC CGTCGGTGGC ACGCTCGTCG TGTCCACCCT CGGCGGCTAC GCGTTCGGCC GCTTCCGCTT CCCCGGCAGG GACGCGCTGT TCCTGCTGAC CCTGGCGATC CTGATGGTGC CGTACGCGAC CATCCTCATC GCGCTGTACG TGCTGCTGGG CTGGCTGGGC CTGGAGGACT CGCTGCTCGG GCTGAGCCTG GTGCTGACCA CGTTCCAGCT GCCGTTCTCG GTGTTCATGA TGCGCAACTC GTTCGCGGCC GTCCCGGTCG AGCTGGAGGA GTCCGCGCGC GTGGACGGCT GCACCTCGTT CGGCGCGCTG CTGCGGATCA TGCTGCCCGC CGTGCGACCG GGCCTGGTCA CCGTGGGCCT GTTCGCGTTC CTGGCCTCGT GGAGCGAGTT CTTCGCGCCG CTGATCCTGC TCAACTCCAC CGACAAGTTC ACCACCACCC TCGCCGTGGT CAACCTGCGC ACCGCCAGCC ACGGCGCCGT CGACTACGCC GCCCTGGAGG CCGGGGTGGT GGTCATGGCC GTGCCGTGCC TGCTGCTGTT CGCGTTCCTG CAGCGCAGCT ACGTGCGCGG CTTCACCTCG GGCGCCCTGA AGGGCTGA
|
Protein sequence | MAKTLVVDET ERGPLGMHWL TCAALAVLFL FPLVWAAFAS VRTDTGFGLE NYARLFSSED GVRPRHVLNS AVVSALTVGG TLVVSTLGGY AFGRFRFPGR DALFLLTLAI LMVPYATILI ALYVLLGWLG LEDSLLGLSL VLTTFQLPFS VFMMRNSFAA VPVELEESAR VDGCTSFGAL LRIMLPAVRP GLVTVGLFAF LASWSEFFAP LILLNSTDKF TTTLAVVNLR TASHGAVDYA ALEAGVVVMA VPCLLLFAFL QRSYVRGFTS GALKG
|
| |