Gene Amir_2834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2834 
Symbol 
ID8327023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3262787 
End bp3263614 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content70% 
IMG OID644943368 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003100609 
Protein GI256376949 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGAAGA CCCTCGTGGT GGACGAGACC GAGCGCGGAC CGCTCGGGAT GCACTGGCTG 
ACCTGCGCGG CGCTGGCCGT GCTGTTCCTG TTCCCCCTGG TGTGGGCCGC TTTCGCGTCG
GTGCGCACGG ACACCGGGTT CGGCCTGGAG AACTACGCCA GGCTGTTCTC CTCCGAGGAC
GGCGTGCGAC CGCGGCACGT GCTCAACAGC GCCGTCGTCA GCGCGCTCAC CGTCGGTGGC
ACGCTCGTCG TGTCCACCCT CGGCGGCTAC GCGTTCGGCC GCTTCCGCTT CCCCGGCAGG
GACGCGCTGT TCCTGCTGAC CCTGGCGATC CTGATGGTGC CGTACGCGAC CATCCTCATC
GCGCTGTACG TGCTGCTGGG CTGGCTGGGC CTGGAGGACT CGCTGCTCGG GCTGAGCCTG
GTGCTGACCA CGTTCCAGCT GCCGTTCTCG GTGTTCATGA TGCGCAACTC GTTCGCGGCC
GTCCCGGTCG AGCTGGAGGA GTCCGCGCGC GTGGACGGCT GCACCTCGTT CGGCGCGCTG
CTGCGGATCA TGCTGCCCGC CGTGCGACCG GGCCTGGTCA CCGTGGGCCT GTTCGCGTTC
CTGGCCTCGT GGAGCGAGTT CTTCGCGCCG CTGATCCTGC TCAACTCCAC CGACAAGTTC
ACCACCACCC TCGCCGTGGT CAACCTGCGC ACCGCCAGCC ACGGCGCCGT CGACTACGCC
GCCCTGGAGG CCGGGGTGGT GGTCATGGCC GTGCCGTGCC TGCTGCTGTT CGCGTTCCTG
CAGCGCAGCT ACGTGCGCGG CTTCACCTCG GGCGCCCTGA AGGGCTGA
 
Protein sequence
MAKTLVVDET ERGPLGMHWL TCAALAVLFL FPLVWAAFAS VRTDTGFGLE NYARLFSSED 
GVRPRHVLNS AVVSALTVGG TLVVSTLGGY AFGRFRFPGR DALFLLTLAI LMVPYATILI
ALYVLLGWLG LEDSLLGLSL VLTTFQLPFS VFMMRNSFAA VPVELEESAR VDGCTSFGAL
LRIMLPAVRP GLVTVGLFAF LASWSEFFAP LILLNSTDKF TTTLAVVNLR TASHGAVDYA
ALEAGVVVMA VPCLLLFAFL QRSYVRGFTS GALKG