Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2804 |
Symbol | |
ID | 8326993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 3227795 |
End bp | 3228592 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644943340 |
Product | GAF domain protein |
Protein accession | YP_003100581 |
Protein GI | 256376921 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.546836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGATCA CCCCGCAGGA AAGCGCCCCG CAGGAAAGCG CCCCGCAGGA GCGCGCCGAA GCAGCGAGCG ACCGGGAAGT GCGGGTGGCG CGCGCGTTCG TGCGCCTGGC CGACACGCTC GTCGCGGACT TCGACGTCGC CGAGTTCCTC CACATGCTCA CCGAGCAGTG CGTCGAACTG CTCGACTCGA CGGCCGCAGG CGTGGTGCTG GTCGACCGGT GGTCGGTGCC GCACGTGACC GCGAGCTCGT CGCAGGAGGC GGAGCTGCTG GAGCTGTTCG CCGTGCAGGC CGACGACGGC CCCTGCATCG ACTGCGTCCG CTCCCAGACC CCCGTCTCCT GCCCCGACCT GCGCGAGGCC ACCACCCGCT GGCCCCGCTT CACCGCGGCA GCCCACGAAT GCGGCTTCCG CTCCGCCCAC GCCCTGCCCC TGCGCCTGCG CGAACACGCC GTAGGCGCGA TCACCCTGCT CAACACCCAA CCCGGCGACC TGAGCCAGGA CGTGCTCCAA CTCGGCCAGG CCCTCGCCGA CGTCGCCACC ATCGGCATCC TGCAACAACG CGCCATCAAG CACGCCGACC AGCTCAGCGG CCAACTCCAG ACGGCGCTCG GCAGCAGGAT CGTGATCGAG CAGGCCAAGG GAATACTGGC GGTCTGGGGC GAGATCCCGC TCGACGTGGC GTTCAGCAGG CTGCGCGGCT ACGCGCGCGC GCACCACCAC CGCCTCACCG ACCTGGCCCA CGCCGTCACC ACCGGCGTGG CCGACAGGGC TGCGATCCTC GCCCACCGGG CGCGCTGA
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Protein sequence | MVITPQESAP QESAPQERAE AASDREVRVA RAFVRLADTL VADFDVAEFL HMLTEQCVEL LDSTAAGVVL VDRWSVPHVT ASSSQEAELL ELFAVQADDG PCIDCVRSQT PVSCPDLREA TTRWPRFTAA AHECGFRSAH ALPLRLREHA VGAITLLNTQ PGDLSQDVLQ LGQALADVAT IGILQQRAIK HADQLSGQLQ TALGSRIVIE QAKGILAVWG EIPLDVAFSR LRGYARAHHH RLTDLAHAVT TGVADRAAIL AHRAR
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